Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
CD28P10747 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
CD28P10747 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CD28P10747 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
CD28P10747 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CD28P10747 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.78□□□□□ -0.36
CD28P10747 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.78□□□□□ -0.36
CD28P10747 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.78□□□□□ -0.36
CD28P10747 HLA-V-204ENST00000476601 1289 ntBASIC12.78□□□□□ -0.36
CD28P10747 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.78□□□□□ -0.36
CD28P10747 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.78□□□□□ -0.36
CD28P10747 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.78□□□□□ -0.36
CD28P10747 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.78□□□□□ -0.36
CD28P10747 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.78□□□□□ -0.36
CD28P10747 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.78□□□□□ -0.36
CD28P10747 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.78□□□□□ -0.36
CD28P10747 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.78□□□□□ -0.36
CD28P10747 AC012645.4-201ENST00000610691 1061 ntBASIC12.78□□□□□ -0.36
CD28P10747 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.78□□□□□ -0.36
CD28P10747 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CD28P10747 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC12.78□□□□□ -0.36
CD28P10747 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CD28P10747 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CD28P10747 CETN4P-206ENST00000642099 2168 ntBASIC12.78□□□□□ -0.36
CD28P10747 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC12.78□□□□□ -0.36
CD28P10747 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC12.78□□□□□ -0.36
CD28P10747 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 AC080080.1-201ENST00000625121 2420 ntBASIC12.78□□□□□ -0.36
CD28P10747 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.78□□□□□ -0.36
CD28P10747 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CD28P10747 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC12.78□□□□□ -0.36
CD28P10747 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.78□□□□□ -0.36
CD28P10747 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC12.78□□□□□ -0.36
CD28P10747 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC12.78□□□□□ -0.36
CD28P10747 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CD28P10747 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CD28P10747 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CD28P10747 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC12.77□□□□□ -0.36
CD28P10747 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.77□□□□□ -0.36
CD28P10747 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CD28P10747 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CD28P10747 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.77□□□□□ -0.37
CD28P10747 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.77□□□□□ -0.37
CD28P10747 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.77□□□□□ -0.37
CD28P10747 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD28P10747 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.77□□□□□ -0.37
CD28P10747 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC12.77□□□□□ -0.37
CD28P10747 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
CD28P10747 AC005225.4-201ENST00000557330 545 ntBASIC12.77□□□□□ -0.37
CD28P10747 AC105021.1-202ENST00000570572 669 ntBASIC12.77□□□□□ -0.37
CD28P10747 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.77□□□□□ -0.37
CD28P10747 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.77□□□□□ -0.37
CD28P10747 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
CD28P10747 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.77□□□□□ -0.37
CD28P10747 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms