Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.43■□□□□ 0.38
FAM228BP0C875 CRYGEP-201ENST00000412192 528 ntBASIC17.43■□□□□ 0.38
FAM228BP0C875 RHOQP3-201ENST00000437982 621 ntBASIC17.43■□□□□ 0.38
FAM228BP0C875 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
FAM228BP0C875 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
FAM228BP0C875 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
FAM228BP0C875 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.43■□□□□ 0.38
FAM228BP0C875 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.43■□□□□ 0.38
FAM228BP0C875 AL009183.1-201ENST00000603760 355 ntBASIC17.43■□□□□ 0.38
FAM228BP0C875 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
FAM228BP0C875 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.43■□□□□ 0.38
FAM228BP0C875 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.43■□□□□ 0.38
FAM228BP0C875 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
FAM228BP0C875 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
FAM228BP0C875 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.43■□□□□ 0.38
FAM228BP0C875 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
FAM228BP0C875 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
FAM228BP0C875 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.43■□□□□ 0.38
FAM228BP0C875 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FAM228BP0C875 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
FAM228BP0C875 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FAM228BP0C875 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FAM228BP0C875 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FAM228BP0C875 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FAM228BP0C875 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FAM228BP0C875 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FAM228BP0C875 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
FAM228BP0C875 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.42■□□□□ 0.38
FAM228BP0C875 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
FAM228BP0C875 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
FAM228BP0C875 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.42■□□□□ 0.38
FAM228BP0C875 AC022532.1-201ENST00000624563 1728 ntBASIC17.42■□□□□ 0.38
FAM228BP0C875 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.42■□□□□ 0.38
FAM228BP0C875 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FAM228BP0C875 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FAM228BP0C875 AC004870.1-201ENST00000315132 882 ntBASIC17.42■□□□□ 0.38
FAM228BP0C875 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.42■□□□□ 0.38
FAM228BP0C875 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
FAM228BP0C875 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FAM228BP0C875 RNA5SP415-201ENST00000517246 115 ntBASIC17.42■□□□□ 0.38
FAM228BP0C875 IGHV3-22-201ENST00000520721 359 ntBASIC17.42■□□□□ 0.38
FAM228BP0C875 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
FAM228BP0C875 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FAM228BP0C875 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.42■□□□□ 0.38
FAM228BP0C875 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FAM228BP0C875 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FAM228BP0C875 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.42■□□□□ 0.38
FAM228BP0C875 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
FAM228BP0C875 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
FAM228BP0C875 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.42■□□□□ 0.38
FAM228BP0C875 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.42■□□□□ 0.38
FAM228BP0C875 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.42■□□□□ 0.38
FAM228BP0C875 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FAM228BP0C875 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.42■□□□□ 0.38
FAM228BP0C875 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FAM228BP0C875 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FAM228BP0C875 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.42■□□□□ 0.38
FAM228BP0C875 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
FAM228BP0C875 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FAM228BP0C875 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.42■□□□□ 0.38
FAM228BP0C875 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
FAM228BP0C875 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FAM228BP0C875 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.41■□□□□ 0.38
FAM228BP0C875 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.41■□□□□ 0.38
FAM228BP0C875 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.41■□□□□ 0.38
FAM228BP0C875 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FAM228BP0C875 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FAM228BP0C875 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FAM228BP0C875 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FAM228BP0C875 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FAM228BP0C875 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.41■□□□□ 0.38
FAM228BP0C875 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FAM228BP0C875 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FAM228BP0C875 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
FAM228BP0C875 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
FAM228BP0C875 FAAHP1-202ENST00000446499 1238 ntBASIC17.41■□□□□ 0.38
FAM228BP0C875 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
FAM228BP0C875 AC109635.5-201ENST00000533593 962 ntBASIC17.41■□□□□ 0.38
FAM228BP0C875 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.41■□□□□ 0.38
FAM228BP0C875 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.41■□□□□ 0.38
FAM228BP0C875 AC096734.2-201ENST00000562054 433 ntBASIC17.41■□□□□ 0.38
FAM228BP0C875 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.41■□□□□ 0.38
FAM228BP0C875 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.41■□□□□ 0.38
FAM228BP0C875 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
FAM228BP0C875 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.41■□□□□ 0.38
FAM228BP0C875 PPT1-215ENST00000641471 2368 ntBASIC17.41■□□□□ 0.38
FAM228BP0C875 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FAM228BP0C875 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
FAM228BP0C875 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.41■□□□□ 0.38
FAM228BP0C875 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FAM228BP0C875 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.41■□□□□ 0.38
FAM228BP0C875 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FAM228BP0C875 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FAM228BP0C875 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.41■□□□□ 0.38
FAM228BP0C875 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FAM228BP0C875 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
FAM228BP0C875 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
FAM228BP0C875 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FAM228BP0C875 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
FAM228BP0C875 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms