Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.82□□□□□ -0.04
FREM3P0C091 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
FREM3P0C091 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
FREM3P0C091 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.82□□□□□ -0.04
FREM3P0C091 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FREM3P0C091 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FREM3P0C091 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FREM3P0C091 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FREM3P0C091 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
FREM3P0C091 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FREM3P0C091 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
FREM3P0C091 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.82□□□□□ -0.04
FREM3P0C091 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FREM3P0C091 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FREM3P0C091 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.82□□□□□ -0.04
FREM3P0C091 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.82□□□□□ -0.04
FREM3P0C091 KLF2P3-201ENST00000451977 1087 ntBASIC14.82□□□□□ -0.04
FREM3P0C091 AC004890.2-204ENST00000481968 304 ntBASIC14.82□□□□□ -0.04
FREM3P0C091 DUX4L27-201ENST00000554796 1261 ntBASIC14.82□□□□□ -0.04
FREM3P0C091 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.82□□□□□ -0.04
FREM3P0C091 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FREM3P0C091 AL365330.1-201ENST00000607459 531 ntBASIC14.82□□□□□ -0.04
FREM3P0C091 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.82□□□□□ -0.04
FREM3P0C091 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.82□□□□□ -0.04
FREM3P0C091 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
FREM3P0C091 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FREM3P0C091 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FREM3P0C091 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FREM3P0C091 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FREM3P0C091 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FREM3P0C091 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
FREM3P0C091 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FREM3P0C091 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.82□□□□□ -0.04
FREM3P0C091 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.82□□□□□ -0.04
FREM3P0C091 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.81□□□□□ -0.04
FREM3P0C091 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.81□□□□□ -0.04
FREM3P0C091 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.81□□□□□ -0.04
FREM3P0C091 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FREM3P0C091 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FREM3P0C091 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.81□□□□□ -0.04
FREM3P0C091 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FREM3P0C091 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.81□□□□□ -0.04
FREM3P0C091 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.81□□□□□ -0.04
FREM3P0C091 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FREM3P0C091 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FREM3P0C091 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.81□□□□□ -0.04
FREM3P0C091 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FREM3P0C091 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FREM3P0C091 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
FREM3P0C091 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
FREM3P0C091 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FREM3P0C091 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FREM3P0C091 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
FREM3P0C091 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.81□□□□□ -0.04
FREM3P0C091 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FREM3P0C091 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FREM3P0C091 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FREM3P0C091 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
FREM3P0C091 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.81□□□□□ -0.04
FREM3P0C091 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FREM3P0C091 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
FREM3P0C091 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
FREM3P0C091 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FREM3P0C091 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FREM3P0C091 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
FREM3P0C091 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FREM3P0C091 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
FREM3P0C091 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.81□□□□□ -0.04
FREM3P0C091 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.81□□□□□ -0.04
FREM3P0C091 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FREM3P0C091 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FREM3P0C091 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
FREM3P0C091 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
FREM3P0C091 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
FREM3P0C091 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.81□□□□□ -0.04
FREM3P0C091 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.81□□□□□ -0.04
FREM3P0C091 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.8□□□□□ -0.04
FREM3P0C091 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FREM3P0C091 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FREM3P0C091 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
FREM3P0C091 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
FREM3P0C091 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FREM3P0C091 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
FREM3P0C091 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FREM3P0C091 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
FREM3P0C091 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
FREM3P0C091 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FREM3P0C091 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FREM3P0C091 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
FREM3P0C091 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FREM3P0C091 MIR346-201ENST00000362234 95 ntBASIC14.8□□□□□ -0.04
FREM3P0C091 MIR661-201ENST00000384842 89 ntBASIC14.8□□□□□ -0.04
FREM3P0C091 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
FREM3P0C091 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.8□□□□□ -0.04
FREM3P0C091 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.8□□□□□ -0.04
FREM3P0C091 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.8□□□□□ -0.04
FREM3P0C091 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.8□□□□□ -0.04
FREM3P0C091 AC245100.5-201ENST00000452108 331 ntBASIC14.8□□□□□ -0.04
FREM3P0C091 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
FREM3P0C091 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms