Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPM1P09493 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.1■□□□□ 0.49
TPM1P09493 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.1■□□□□ 0.49
TPM1P09493 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.1■□□□□ 0.49
TPM1P09493 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.1■□□□□ 0.49
TPM1P09493 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
TPM1P09493 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TPM1P09493 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
TPM1P09493 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPM1P09493 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.1■□□□□ 0.49
TPM1P09493 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPM1P09493 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPM1P09493 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPM1P09493 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPM1P09493 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.09■□□□□ 0.49
TPM1P09493 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.09■□□□□ 0.49
TPM1P09493 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
TPM1P09493 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TPM1P09493 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPM1P09493 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPM1P09493 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
TPM1P09493 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.09■□□□□ 0.49
TPM1P09493 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.09■□□□□ 0.49
TPM1P09493 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPM1P09493 IER3-202ENST00000376377 1350 ntBASIC18.09■□□□□ 0.49
TPM1P09493 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPM1P09493 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPM1P09493 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TPM1P09493 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TPM1P09493 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TPM1P09493 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TPM1P09493 PCED1CP-201ENST00000419887 785 ntBASIC18.09■□□□□ 0.49
TPM1P09493 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
TPM1P09493 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TPM1P09493 AC087163.2-201ENST00000457299 853 ntBASIC18.09■□□□□ 0.49
TPM1P09493 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.09■□□□□ 0.49
TPM1P09493 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
TPM1P09493 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.09■□□□□ 0.49
TPM1P09493 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.09■□□□□ 0.49
TPM1P09493 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
TPM1P09493 AL139288.1-201ENST00000623748 933 ntBASIC18.09■□□□□ 0.49
TPM1P09493 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC18.09■□□□□ 0.49
TPM1P09493 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPM1P09493 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.09■□□□□ 0.49
TPM1P09493 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TPM1P09493 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPM1P09493 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPM1P09493 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TPM1P09493 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
TPM1P09493 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPM1P09493 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.09■□□□□ 0.49
TPM1P09493 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPM1P09493 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
TPM1P09493 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.09■□□□□ 0.49
TPM1P09493 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
TPM1P09493 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.08■□□□□ 0.49
TPM1P09493 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TPM1P09493 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TPM1P09493 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
TPM1P09493 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
TPM1P09493 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TPM1P09493 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TPM1P09493 C1R-202ENST00000536053 2347 ntTSL 2 BASIC18.08■□□□□ 0.48
TPM1P09493 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TPM1P09493 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TPM1P09493 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TPM1P09493 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TPM1P09493 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.08■□□□□ 0.48
TPM1P09493 KRT16P4-201ENST00000453883 522 ntBASIC18.08■□□□□ 0.48
TPM1P09493 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.08■□□□□ 0.48
TPM1P09493 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.08■□□□□ 0.48
TPM1P09493 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.08■□□□□ 0.48
TPM1P09493 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TPM1P09493 AC020765.3-201ENST00000613051 740 ntBASIC18.08■□□□□ 0.48
TPM1P09493 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
TPM1P09493 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TPM1P09493 SBF1P1-201ENST00000444527 5631 ntBASIC18.08■□□□□ 0.48
TPM1P09493 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TPM1P09493 LINC02447-202ENST00000501888 2146 ntBASIC18.08■□□□□ 0.48
TPM1P09493 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TPM1P09493 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.08■□□□□ 0.48
TPM1P09493 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
TPM1P09493 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.08■□□□□ 0.48
TPM1P09493 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.08■□□□□ 0.48
TPM1P09493 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TPM1P09493 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TPM1P09493 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TPM1P09493 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
TPM1P09493 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC18.08■□□□□ 0.48
TPM1P09493 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
TPM1P09493 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.07■□□□□ 0.48
TPM1P09493 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM1P09493 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.07■□□□□ 0.48
TPM1P09493 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM1P09493 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TPM1P09493 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TPM1P09493 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC18.07■□□□□ 0.48
TPM1P09493 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.07■□□□□ 0.48
TPM1P09493 CDC14C-201ENST00000428251 1719 ntBASIC18.07■□□□□ 0.48
TPM1P09493 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms