Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CTSDP07339 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CTSDP07339 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.63□□□□□ -0.23
CTSDP07339 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.63□□□□□ -0.23
CTSDP07339 AC136621.1-201ENST00000624017 2304 ntBASIC13.63□□□□□ -0.23
CTSDP07339 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.63□□□□□ -0.23
CTSDP07339 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.63□□□□□ -0.23
CTSDP07339 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CTSDP07339 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.62□□□□□ -0.23
CTSDP07339 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CTSDP07339 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CTSDP07339 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CTSDP07339 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.62□□□□□ -0.23
CTSDP07339 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.62□□□□□ -0.23
CTSDP07339 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CTSDP07339 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CTSDP07339 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.62□□□□□ -0.23
CTSDP07339 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CTSDP07339 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.62□□□□□ -0.23
CTSDP07339 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.62□□□□□ -0.23
CTSDP07339 TOB2P1-201ENST00000469761 992 ntBASIC13.62□□□□□ -0.23
CTSDP07339 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.62□□□□□ -0.23
CTSDP07339 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 FAM86EP-206ENST00000510506 987 ntBASIC13.62□□□□□ -0.23
CTSDP07339 AC087641.1-201ENST00000557561 1021 ntBASIC13.62□□□□□ -0.23
CTSDP07339 TPSP2-201ENST00000561760 610 ntBASIC13.62□□□□□ -0.23
CTSDP07339 AL109954.1-202ENST00000564051 2148 ntBASIC13.62□□□□□ -0.23
CTSDP07339 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CTSDP07339 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CTSDP07339 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CTSDP07339 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CTSDP07339 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.62□□□□□ -0.23
CTSDP07339 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.62□□□□□ -0.23
CTSDP07339 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.62□□□□□ -0.23
CTSDP07339 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.62□□□□□ -0.23
CTSDP07339 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CTSDP07339 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CTSDP07339 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSDP07339 AC005332.1-201ENST00000577698 1310 ntBASIC13.62□□□□□ -0.23
CTSDP07339 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CTSDP07339 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CTSDP07339 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CTSDP07339 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.61□□□□□ -0.23
CTSDP07339 AC005622.1-201ENST00000636801 1703 ntBASIC13.61□□□□□ -0.23
CTSDP07339 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.61□□□□□ -0.23
CTSDP07339 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CTSDP07339 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CTSDP07339 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CTSDP07339 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.61□□□□□ -0.23
CTSDP07339 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
CTSDP07339 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.61□□□□□ -0.23
CTSDP07339 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CTSDP07339 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CTSDP07339 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
CTSDP07339 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.61□□□□□ -0.23
CTSDP07339 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 PCED1CP-201ENST00000419887 785 ntBASIC13.61□□□□□ -0.23
CTSDP07339 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSDP07339 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.61□□□□□ -0.23
CTSDP07339 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms