Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
TCRAP04437 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRAP04437 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TCRAP04437 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRAP04437 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.5□□□□□ -0.41
TCRAP04437 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRAP04437 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TCRAP04437 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRAP04437 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TCRAP04437 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TCRAP04437 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TCRAP04437 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.49□□□□□ -0.41
TCRAP04437 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TCRAP04437 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TCRAP04437 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.49□□□□□ -0.41
TCRAP04437 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRAP04437 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.49□□□□□ -0.41
TCRAP04437 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC12.49□□□□□ -0.41
TCRAP04437 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRAP04437 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.49□□□□□ -0.41
TCRAP04437 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRAP04437 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRAP04437 SLC22A20-204ENST00000530038 1673 ntBASIC12.49□□□□□ -0.41
TCRAP04437 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TCRAP04437 AC092919.2-201ENST00000623631 1645 ntBASIC12.49□□□□□ -0.41
TCRAP04437 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TCRAP04437 AL161772.1-201ENST00000610494 4412 ntBASIC12.49□□□□□ -0.41
TCRAP04437 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRAP04437 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TCRAP04437 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
TCRAP04437 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRAP04437 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRAP04437 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TCRAP04437 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC12.49□□□□□ -0.41
TCRAP04437 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TCRAP04437 PMS2P1-201ENST00000431037 1228 ntBASIC12.49□□□□□ -0.41
TCRAP04437 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRAP04437 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC12.49□□□□□ -0.41
TCRAP04437 LINC00265-3P-201ENST00000447588 903 ntBASIC12.49□□□□□ -0.41
TCRAP04437 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC12.49□□□□□ -0.41
TCRAP04437 DUX4L26-201ENST00000489078 1255 ntBASIC12.49□□□□□ -0.41
TCRAP04437 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRAP04437 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC12.49□□□□□ -0.41
TCRAP04437 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
TCRAP04437 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
TCRAP04437 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC12.49□□□□□ -0.41
TCRAP04437 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC12.49□□□□□ -0.41
TCRAP04437 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TCRAP04437 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC12.49□□□□□ -0.41
TCRAP04437 AL121956.5-201ENST00000625261 221 ntBASIC12.49□□□□□ -0.41
TCRAP04437 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC12.49□□□□□ -0.41
TCRAP04437 AL022326.1-202ENST00000641533 845 ntBASIC12.49□□□□□ -0.41
TCRAP04437 AF228730.7-201ENST00000641842 219 ntBASIC12.49□□□□□ -0.41
TCRAP04437 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.49□□□□□ -0.41
TCRAP04437 LINC02228-204ENST00000642115 2962 ntBASIC12.49□□□□□ -0.41
TCRAP04437 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRAP04437 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TCRAP04437 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRAP04437 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
TCRAP04437 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.49□□□□□ -0.41
TCRAP04437 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.49□□□□□ -0.41
TCRAP04437 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TCRAP04437 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRAP04437 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.48□□□□□ -0.41
TCRAP04437 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
TCRAP04437 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.48□□□□□ -0.41
TCRAP04437 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRAP04437 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
TCRAP04437 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.48□□□□□ -0.41
TCRAP04437 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
TCRAP04437 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRAP04437 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRAP04437 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRAP04437 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
TCRAP04437 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRAP04437 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TCRAP04437 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRAP04437 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRAP04437 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.48□□□□□ -0.41
TCRAP04437 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.48□□□□□ -0.41
TCRAP04437 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TCRAP04437 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRAP04437 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC12.48□□□□□ -0.41
TCRAP04437 AL353732.1-201ENST00000569618 1459 ntBASIC12.48□□□□□ -0.41
TCRAP04437 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TCRAP04437 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.48□□□□□ -0.41
TCRAP04437 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC12.48□□□□□ -0.41
TCRAP04437 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TCRAP04437 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TCRAP04437 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRAP04437 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC12.48□□□□□ -0.41
TCRAP04437 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.48□□□□□ -0.41
TCRAP04437 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.48□□□□□ -0.41
TCRAP04437 AC087641.1-201ENST00000557561 1021 ntBASIC12.48□□□□□ -0.41
TCRAP04437 AP002414.4-201ENST00000589764 1148 ntBASIC12.48□□□□□ -0.41
TCRAP04437 AC092329.2-201ENST00000598402 547 ntBASIC12.48□□□□□ -0.41
TCRAP04437 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.48□□□□□ -0.41
TCRAP04437 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
TCRAP04437 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC12.48□□□□□ -0.41
TCRAP04437 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms