Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
LCATP04180 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.36□□□□□ -0.11
LCATP04180 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LCATP04180 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LCATP04180 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LCATP04180 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.36□□□□□ -0.11
LCATP04180 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LCATP04180 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LCATP04180 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LCATP04180 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.36□□□□□ -0.11
LCATP04180 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.36□□□□□ -0.11
LCATP04180 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LCATP04180 AC026691.1-201ENST00000602502 2017 ntBASIC14.36□□□□□ -0.11
LCATP04180 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.36□□□□□ -0.11
LCATP04180 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.36□□□□□ -0.11
LCATP04180 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.36□□□□□ -0.11
LCATP04180 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LCATP04180 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LCATP04180 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LCATP04180 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.35□□□□□ -0.11
LCATP04180 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.35□□□□□ -0.11
LCATP04180 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.35□□□□□ -0.11
LCATP04180 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.35□□□□□ -0.11
LCATP04180 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
LCATP04180 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.35□□□□□ -0.11
LCATP04180 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.35□□□□□ -0.11
LCATP04180 MIR3909-201ENST00000579518 119 ntBASIC14.35□□□□□ -0.11
LCATP04180 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.35□□□□□ -0.11
LCATP04180 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.35□□□□□ -0.11
LCATP04180 BX640515.1-201ENST00000617215 977 ntBASIC14.35□□□□□ -0.11
LCATP04180 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.35□□□□□ -0.11
LCATP04180 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
LCATP04180 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.35□□□□□ -0.11
LCATP04180 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LCATP04180 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.35□□□□□ -0.11
LCATP04180 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.35□□□□□ -0.11
LCATP04180 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LCATP04180 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
LCATP04180 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCATP04180 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 MTHFR-217ENST00000641820 1569 ntBASIC14.34□□□□□ -0.11
LCATP04180 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.34□□□□□ -0.11
LCATP04180 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
LCATP04180 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
LCATP04180 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LCATP04180 AC006449.6-201ENST00000612330 2296 ntBASIC14.34□□□□□ -0.11
LCATP04180 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
LCATP04180 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.34□□□□□ -0.11
LCATP04180 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LCATP04180 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LCATP04180 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LCATP04180 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.34□□□□□ -0.11
LCATP04180 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LCATP04180 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.34□□□□□ -0.11
LCATP04180 RNA5SP416-201ENST00000516838 111 ntBASIC14.34□□□□□ -0.11
LCATP04180 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.34□□□□□ -0.11
LCATP04180 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.34□□□□□ -0.11
LCATP04180 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.34□□□□□ -0.11
LCATP04180 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.34□□□□□ -0.11
LCATP04180 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.34□□□□□ -0.11
LCATP04180 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCATP04180 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms