Protein–RNA interactions for Protein: P02730

SLC4A1, Band 3 anion transport protein, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A1P02730 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC4A1P02730 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC4A1P02730 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SLC4A1P02730 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC4A1P02730 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC4A1P02730 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC4A1P02730 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC4A1P02730 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.63■□□□□ 0.25
SLC4A1P02730 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.63■□□□□ 0.25
SLC4A1P02730 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC4A1P02730 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC4A1P02730 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC4A1P02730 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SLC4A1P02730 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.63■□□□□ 0.25
SLC4A1P02730 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.63■□□□□ 0.25
SLC4A1P02730 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC4A1P02730 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SLC4A1P02730 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SLC4A1P02730 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC4A1P02730 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC4A1P02730 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC4A1P02730 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
SLC4A1P02730 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC4A1P02730 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC4A1P02730 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC4A1P02730 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SLC4A1P02730 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC4A1P02730 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC4A1P02730 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC4A1P02730 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC4A1P02730 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
SLC4A1P02730 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC4A1P02730 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC4A1P02730 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC4A1P02730 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC4A1P02730 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SLC4A1P02730 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SLC4A1P02730 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
SLC4A1P02730 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC4A1P02730 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC4A1P02730 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC4A1P02730 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC4A1P02730 AC002056.1-201ENST00000395613 760 ntBASIC16.62■□□□□ 0.25
SLC4A1P02730 PMS2P4-201ENST00000412466 1052 ntBASIC16.62■□□□□ 0.25
SLC4A1P02730 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC4A1P02730 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC4A1P02730 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC4A1P02730 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC4A1P02730 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.62■□□□□ 0.25
SLC4A1P02730 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC4A1P02730 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
SLC4A1P02730 AC099522.2-201ENST00000607001 744 ntBASIC16.62■□□□□ 0.25
SLC4A1P02730 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SLC4A1P02730 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC4A1P02730 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC4A1P02730 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
SLC4A1P02730 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SLC4A1P02730 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC4A1P02730 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC4A1P02730 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC4A1P02730 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC4A1P02730 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC4A1P02730 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SLC4A1P02730 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC4A1P02730 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC4A1P02730 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SLC4A1P02730 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC4A1P02730 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC4A1P02730 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SLC4A1P02730 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC4A1P02730 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC4A1P02730 LINC02199-201ENST00000506655 2702 ntBASIC16.61■□□□□ 0.25
SLC4A1P02730 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC4A1P02730 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC4A1P02730 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC4A1P02730 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
SLC4A1P02730 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
SLC4A1P02730 AC046158.3-201ENST00000624947 2558 ntBASIC16.61■□□□□ 0.25
SLC4A1P02730 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC4A1P02730 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC4A1P02730 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC4A1P02730 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SLC4A1P02730 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC4A1P02730 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC4A1P02730 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC4A1P02730 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC4A1P02730 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC4A1P02730 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC4A1P02730 MCCD1P2-201ENST00000423228 335 ntBASIC16.61■□□□□ 0.25
SLC4A1P02730 DNAJB3-201ENST00000446806 729 ntBASIC16.61■□□□□ 0.25
SLC4A1P02730 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC4A1P02730 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC4A1P02730 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SLC4A1P02730 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC4A1P02730 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC4A1P02730 MTDHP5-201ENST00000598980 586 ntBASIC16.61■□□□□ 0.25
SLC4A1P02730 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
SLC4A1P02730 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC4A1P02730 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC4A1P02730 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms