Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.4■□□□□ 0.54
ALDH1A1P00352 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.4■□□□□ 0.54
ALDH1A1P00352 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ALDH1A1P00352 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ALDH1A1P00352 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALDH1A1P00352 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALDH1A1P00352 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ALDH1A1P00352 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALDH1A1P00352 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALDH1A1P00352 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ALDH1A1P00352 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALDH1A1P00352 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALDH1A1P00352 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ALDH1A1P00352 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ALDH1A1P00352 ACKR1-201ENST00000368121 1240 ntBASIC18.4■□□□□ 0.54
ALDH1A1P00352 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALDH1A1P00352 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ALDH1A1P00352 NUS1P3-201ENST00000423502 862 ntBASIC18.4■□□□□ 0.54
ALDH1A1P00352 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.4■□□□□ 0.54
ALDH1A1P00352 AC091804.1-201ENST00000486888 567 ntBASIC18.4■□□□□ 0.54
ALDH1A1P00352 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC18.4■□□□□ 0.54
ALDH1A1P00352 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
ALDH1A1P00352 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ALDH1A1P00352 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.4■□□□□ 0.54
ALDH1A1P00352 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.4■□□□□ 0.54
ALDH1A1P00352 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.4■□□□□ 0.54
ALDH1A1P00352 SNX1-214ENST00000625244 324 ntTSL 5 BASIC18.4■□□□□ 0.54
ALDH1A1P00352 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC18.4■□□□□ 0.54
ALDH1A1P00352 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALDH1A1P00352 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ALDH1A1P00352 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.4■□□□□ 0.54
ALDH1A1P00352 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALDH1A1P00352 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALDH1A1P00352 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ALDH1A1P00352 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ALDH1A1P00352 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALDH1A1P00352 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ALDH1A1P00352 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ALDH1A1P00352 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
ALDH1A1P00352 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ALDH1A1P00352 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ALDH1A1P00352 PCDHB17P-201ENST00000539533 2393 ntBASIC18.39■□□□□ 0.53
ALDH1A1P00352 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ALDH1A1P00352 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALDH1A1P00352 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.39■□□□□ 0.53
ALDH1A1P00352 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
ALDH1A1P00352 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALDH1A1P00352 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALDH1A1P00352 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALDH1A1P00352 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALDH1A1P00352 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
ALDH1A1P00352 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC18.39■□□□□ 0.53
ALDH1A1P00352 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC18.39■□□□□ 0.53
ALDH1A1P00352 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ALDH1A1P00352 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
ALDH1A1P00352 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.39■□□□□ 0.53
ALDH1A1P00352 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ALDH1A1P00352 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ALDH1A1P00352 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALDH1A1P00352 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ALDH1A1P00352 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALDH1A1P00352 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALDH1A1P00352 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ALDH1A1P00352 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.39■□□□□ 0.53
ALDH1A1P00352 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ALDH1A1P00352 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.39■□□□□ 0.53
ALDH1A1P00352 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ALDH1A1P00352 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALDH1A1P00352 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.39■□□□□ 0.53
ALDH1A1P00352 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.39■□□□□ 0.53
ALDH1A1P00352 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ALDH1A1P00352 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALDH1A1P00352 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALDH1A1P00352 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALDH1A1P00352 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.38■□□□□ 0.53
ALDH1A1P00352 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ALDH1A1P00352 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ALDH1A1P00352 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALDH1A1P00352 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC18.38■□□□□ 0.53
ALDH1A1P00352 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ALDH1A1P00352 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALDH1A1P00352 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALDH1A1P00352 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALDH1A1P00352 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALDH1A1P00352 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ALDH1A1P00352 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ALDH1A1P00352 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALDH1A1P00352 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.38■□□□□ 0.53
ALDH1A1P00352 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC18.38■□□□□ 0.53
ALDH1A1P00352 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC18.38■□□□□ 0.53
ALDH1A1P00352 AL591846.1-201ENST00000451736 433 ntBASIC18.38■□□□□ 0.53
ALDH1A1P00352 MPRIPP1-201ENST00000452433 1089 ntBASIC18.38■□□□□ 0.53
ALDH1A1P00352 UPF3AP2-201ENST00000457924 1132 ntBASIC18.38■□□□□ 0.53
ALDH1A1P00352 VDAC1P7-201ENST00000462417 847 ntBASIC18.38■□□□□ 0.53
ALDH1A1P00352 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.38■□□□□ 0.53
ALDH1A1P00352 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC18.38■□□□□ 0.53
ALDH1A1P00352 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC18.38■□□□□ 0.53
ALDH1A1P00352 ACTG1P17-201ENST00000558391 1119 ntBASIC18.38■□□□□ 0.53
ALDH1A1P00352 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.38■□□□□ 0.53
ALDH1A1P00352 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms