Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNOT4O95628 AL512652.2-201ENST00000625156 1716 ntBASIC14.58□□□□□ -0.08
CNOT4O95628 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
CNOT4O95628 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
CNOT4O95628 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.57□□□□□ -0.08
CNOT4O95628 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 MIR600HG-201ENST00000449175 5984 ntBASIC14.57□□□□□ -0.08
CNOT4O95628 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
CNOT4O95628 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.57□□□□□ -0.08
CNOT4O95628 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.57□□□□□ -0.08
CNOT4O95628 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.57□□□□□ -0.08
CNOT4O95628 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CNOT4O95628 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.57□□□□□ -0.08
CNOT4O95628 AC069335.1-201ENST00000489972 472 ntBASIC14.57□□□□□ -0.08
CNOT4O95628 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CNOT4O95628 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.57□□□□□ -0.08
CNOT4O95628 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.57□□□□□ -0.08
CNOT4O95628 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.57□□□□□ -0.08
CNOT4O95628 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.57□□□□□ -0.08
CNOT4O95628 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.57□□□□□ -0.08
CNOT4O95628 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.57□□□□□ -0.08
CNOT4O95628 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.57□□□□□ -0.08
CNOT4O95628 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.57□□□□□ -0.08
CNOT4O95628 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CNOT4O95628 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.57□□□□□ -0.08
CNOT4O95628 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CNOT4O95628 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNOT4O95628 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.57□□□□□ -0.08
CNOT4O95628 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CNOT4O95628 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT4O95628 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT4O95628 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CNOT4O95628 AL391005.1-201ENST00000623953 2435 ntBASIC14.56□□□□□ -0.08
CNOT4O95628 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT4O95628 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT4O95628 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CNOT4O95628 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT4O95628 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.56□□□□□ -0.08
CNOT4O95628 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.56□□□□□ -0.08
CNOT4O95628 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.56□□□□□ -0.08
CNOT4O95628 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.56□□□□□ -0.08
CNOT4O95628 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT4O95628 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.56□□□□□ -0.08
CNOT4O95628 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CNOT4O95628 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.56□□□□□ -0.08
CNOT4O95628 GPAA1P2-202ENST00000606848 1787 ntBASIC14.56□□□□□ -0.08
CNOT4O95628 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT4O95628 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT4O95628 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT4O95628 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.56□□□□□ -0.08
CNOT4O95628 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT4O95628 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT4O95628 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.56□□□□□ -0.08
CNOT4O95628 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT4O95628 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.56□□□□□ -0.08
CNOT4O95628 KRT18P32-201ENST00000424695 1287 ntBASIC14.56□□□□□ -0.08
CNOT4O95628 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT4O95628 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.56□□□□□ -0.08
CNOT4O95628 AL512356.2-201ENST00000546955 174 ntBASIC14.56□□□□□ -0.08
CNOT4O95628 AP000842.3-202ENST00000569238 1080 ntBASIC14.56□□□□□ -0.08
CNOT4O95628 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.56□□□□□ -0.08
CNOT4O95628 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.56□□□□□ -0.08
CNOT4O95628 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.56□□□□□ -0.08
CNOT4O95628 AC027307.2-201ENST00000591252 911 ntBASIC14.56□□□□□ -0.08
CNOT4O95628 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.56□□□□□ -0.08
CNOT4O95628 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CNOT4O95628 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
CNOT4O95628 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.56□□□□□ -0.08
CNOT4O95628 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT4O95628 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CNOT4O95628 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT4O95628 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT4O95628 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT4O95628 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.56□□□□□ -0.08
CNOT4O95628 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT4O95628 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CNOT4O95628 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms