Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SH2D1AO60880 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SH2D1AO60880 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SH2D1AO60880 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.29□□□□□ -0.44
SH2D1AO60880 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SH2D1AO60880 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SH2D1AO60880 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SH2D1AO60880 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SH2D1AO60880 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SH2D1AO60880 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SH2D1AO60880 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC12.28□□□□□ -0.44
SH2D1AO60880 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SH2D1AO60880 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SH2D1AO60880 AP003680.1-201ENST00000598970 3660 ntBASIC12.28□□□□□ -0.44
SH2D1AO60880 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SH2D1AO60880 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SH2D1AO60880 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SH2D1AO60880 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SH2D1AO60880 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
SH2D1AO60880 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SH2D1AO60880 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC12.28□□□□□ -0.44
SH2D1AO60880 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SH2D1AO60880 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SH2D1AO60880 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SH2D1AO60880 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SH2D1AO60880 AC087163.2-201ENST00000457299 853 ntBASIC12.28□□□□□ -0.44
SH2D1AO60880 DUX4L26-201ENST00000489078 1255 ntBASIC12.28□□□□□ -0.44
SH2D1AO60880 LTBR-211ENST00000543190 785 ntTSL 3 BASIC12.28□□□□□ -0.44
SH2D1AO60880 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC12.28□□□□□ -0.44
SH2D1AO60880 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC12.28□□□□□ -0.44
SH2D1AO60880 AC020765.3-201ENST00000613051 740 ntBASIC12.28□□□□□ -0.44
SH2D1AO60880 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
SH2D1AO60880 REXO1L3P-201ENST00000622202 1288 ntBASIC12.28□□□□□ -0.44
SH2D1AO60880 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SH2D1AO60880 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.28□□□□□ -0.44
SH2D1AO60880 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SH2D1AO60880 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.28□□□□□ -0.44
SH2D1AO60880 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SH2D1AO60880 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SH2D1AO60880 AC016027.1-202ENST00000607927 1699 ntBASIC12.28□□□□□ -0.44
SH2D1AO60880 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.28□□□□□ -0.44
SH2D1AO60880 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SH2D1AO60880 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.28□□□□□ -0.44
SH2D1AO60880 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SH2D1AO60880 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.28□□□□□ -0.44
SH2D1AO60880 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SH2D1AO60880 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SH2D1AO60880 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SH2D1AO60880 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SH2D1AO60880 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SH2D1AO60880 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SH2D1AO60880 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SH2D1AO60880 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.28□□□□□ -0.44
SH2D1AO60880 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SH2D1AO60880 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SH2D1AO60880 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SH2D1AO60880 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SH2D1AO60880 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SH2D1AO60880 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SH2D1AO60880 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SH2D1AO60880 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SH2D1AO60880 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SH2D1AO60880 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SH2D1AO60880 AC023157.3-201ENST00000619086 2088 ntBASIC12.27□□□□□ -0.45
SH2D1AO60880 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SH2D1AO60880 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SH2D1AO60880 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SH2D1AO60880 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SH2D1AO60880 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SH2D1AO60880 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.27□□□□□ -0.45
SH2D1AO60880 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SH2D1AO60880 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.27□□□□□ -0.45
SH2D1AO60880 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
SH2D1AO60880 PMS2P1-201ENST00000431037 1228 ntBASIC12.27□□□□□ -0.45
SH2D1AO60880 PRYP5-201ENST00000451909 266 ntBASIC12.27□□□□□ -0.45
SH2D1AO60880 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SH2D1AO60880 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SH2D1AO60880 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SH2D1AO60880 PPOX-219ENST00000544598 813 ntTSL 2 BASIC12.27□□□□□ -0.45
SH2D1AO60880 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC12.27□□□□□ -0.45
SH2D1AO60880 AP002414.4-201ENST00000589764 1148 ntBASIC12.27□□□□□ -0.45
SH2D1AO60880 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC12.27□□□□□ -0.45
SH2D1AO60880 AL139424.1-201ENST00000607572 797 ntBASIC12.27□□□□□ -0.45
SH2D1AO60880 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC12.27□□□□□ -0.45
SH2D1AO60880 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.45
SH2D1AO60880 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SH2D1AO60880 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SH2D1AO60880 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.27□□□□□ -0.45
SH2D1AO60880 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SH2D1AO60880 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SH2D1AO60880 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SH2D1AO60880 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SH2D1AO60880 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.27□□□□□ -0.45
SH2D1AO60880 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SH2D1AO60880 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SH2D1AO60880 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.27□□□□□ -0.45
SH2D1AO60880 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SH2D1AO60880 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SH2D1AO60880 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SH2D1AO60880 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms