Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HCN1O60741 HYMAI-201ENST00000635591 3347 ntBASIC15.35■□□□□ 0.05
HCN1O60741 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.35■□□□□ 0.05
HCN1O60741 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCN1O60741 KRT8P49-201ENST00000604166 1432 ntBASIC15.34■□□□□ 0.05
HCN1O60741 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HCN1O60741 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HCN1O60741 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HCN1O60741 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HCN1O60741 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
HCN1O60741 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HCN1O60741 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCN1O60741 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HCN1O60741 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
HCN1O60741 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCN1O60741 AC006538.1-201ENST00000567905 1585 ntBASIC15.34■□□□□ 0.05
HCN1O60741 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HCN1O60741 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCN1O60741 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.34■□□□□ 0.05
HCN1O60741 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.34■□□□□ 0.05
HCN1O60741 AC112191.1-201ENST00000523689 701 ntBASIC15.34■□□□□ 0.05
HCN1O60741 AC107918.2-201ENST00000530817 355 ntBASIC15.34■□□□□ 0.05
HCN1O60741 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
HCN1O60741 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HCN1O60741 AC005412.3-201ENST00000580309 715 ntBASIC15.34■□□□□ 0.05
HCN1O60741 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.34■□□□□ 0.05
HCN1O60741 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.34■□□□□ 0.05
HCN1O60741 AC091812.2-201ENST00000619081 385 ntBASIC15.34■□□□□ 0.05
HCN1O60741 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCN1O60741 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HCN1O60741 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HCN1O60741 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.34■□□□□ 0.05
HCN1O60741 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
HCN1O60741 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.34■□□□□ 0.05
HCN1O60741 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCN1O60741 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCN1O60741 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCN1O60741 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HCN1O60741 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCN1O60741 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
HCN1O60741 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
HCN1O60741 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.05
HCN1O60741 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HCN1O60741 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.33■□□□□ 0.05
HCN1O60741 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.33■□□□□ 0.05
HCN1O60741 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
HCN1O60741 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HCN1O60741 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCN1O60741 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCN1O60741 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HCN1O60741 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.33■□□□□ 0.04
HCN1O60741 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCN1O60741 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCN1O60741 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCN1O60741 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HCN1O60741 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCN1O60741 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCN1O60741 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.33■□□□□ 0.04
HCN1O60741 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HCN1O60741 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
HCN1O60741 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.33■□□□□ 0.04
HCN1O60741 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.33■□□□□ 0.04
HCN1O60741 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.33■□□□□ 0.04
HCN1O60741 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
HCN1O60741 AL031432.2-201ENST00000566714 459 ntBASIC15.33■□□□□ 0.04
HCN1O60741 AL928711.1-201ENST00000570165 459 ntBASIC15.33■□□□□ 0.04
HCN1O60741 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCN1O60741 AL596442.2-201ENST00000610240 980 ntBASIC15.33■□□□□ 0.04
HCN1O60741 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.33■□□□□ 0.04
HCN1O60741 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.33■□□□□ 0.04
HCN1O60741 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.33■□□□□ 0.04
HCN1O60741 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.33■□□□□ 0.04
HCN1O60741 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCN1O60741 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.33■□□□□ 0.04
HCN1O60741 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.33■□□□□ 0.04
HCN1O60741 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCN1O60741 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HCN1O60741 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCN1O60741 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCN1O60741 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCN1O60741 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
HCN1O60741 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
HCN1O60741 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HCN1O60741 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HCN1O60741 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HCN1O60741 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCN1O60741 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HCN1O60741 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HCN1O60741 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCN1O60741 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCN1O60741 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
HCN1O60741 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HCN1O60741 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HCN1O60741 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCN1O60741 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HCN1O60741 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCN1O60741 TSPY26P-202ENST00000565928 3884 ntBASIC15.32■□□□□ 0.04
HCN1O60741 AC132872.4-202ENST00000622924 2756 ntBASIC15.32■□□□□ 0.04
HCN1O60741 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
HCN1O60741 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms