Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
PDE6DO43924 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
PDE6DO43924 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.72□□□□□ -0.37
PDE6DO43924 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC12.72□□□□□ -0.37
PDE6DO43924 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.72□□□□□ -0.37
PDE6DO43924 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC12.72□□□□□ -0.37
PDE6DO43924 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 REXO2-216ENST00000544196 452 ntTSL 3 BASIC12.72□□□□□ -0.37
PDE6DO43924 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.72□□□□□ -0.37
PDE6DO43924 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC12.72□□□□□ -0.37
PDE6DO43924 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC12.72□□□□□ -0.37
PDE6DO43924 AC010654.1-201ENST00000615722 808 ntBASIC12.72□□□□□ -0.37
PDE6DO43924 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
PDE6DO43924 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
PDE6DO43924 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.72□□□□□ -0.37
PDE6DO43924 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
PDE6DO43924 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
PDE6DO43924 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
PDE6DO43924 CICP23-201ENST00000605013 2741 ntBASIC12.72□□□□□ -0.37
PDE6DO43924 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
PDE6DO43924 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.72□□□□□ -0.37
PDE6DO43924 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.72□□□□□ -0.37
PDE6DO43924 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PDE6DO43924 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.71□□□□□ -0.37
PDE6DO43924 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PDE6DO43924 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PDE6DO43924 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PDE6DO43924 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PDE6DO43924 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
PDE6DO43924 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.71□□□□□ -0.37
PDE6DO43924 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PDE6DO43924 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PDE6DO43924 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PDE6DO43924 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
PDE6DO43924 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PDE6DO43924 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.71□□□□□ -0.37
PDE6DO43924 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PDE6DO43924 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
PDE6DO43924 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC12.71□□□□□ -0.37
PDE6DO43924 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
PDE6DO43924 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PDE6DO43924 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PDE6DO43924 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.71□□□□□ -0.37
PDE6DO43924 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PDE6DO43924 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
PDE6DO43924 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.71□□□□□ -0.37
PDE6DO43924 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
PDE6DO43924 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PDE6DO43924 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC12.71□□□□□ -0.37
PDE6DO43924 NUS1P1-201ENST00000446295 882 ntBASIC12.71□□□□□ -0.37
PDE6DO43924 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC12.71□□□□□ -0.37
PDE6DO43924 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PDE6DO43924 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
PDE6DO43924 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
PDE6DO43924 CD320-202ENST00000537716 1119 ntTSL 2 BASIC12.71□□□□□ -0.37
PDE6DO43924 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PDE6DO43924 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC12.71□□□□□ -0.37
PDE6DO43924 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC12.71□□□□□ -0.37
PDE6DO43924 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC12.71□□□□□ -0.37
PDE6DO43924 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.71□□□□□ -0.37
PDE6DO43924 AL390719.2-201ENST00000606993 987 ntBASIC12.71□□□□□ -0.37
PDE6DO43924 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
PDE6DO43924 AD001527.2-201ENST00000622994 785 ntBASIC12.71□□□□□ -0.37
PDE6DO43924 AC073592.5-201ENST00000624854 528 ntBASIC12.71□□□□□ -0.37
PDE6DO43924 AL590326.2-201ENST00000625139 305 ntBASIC12.71□□□□□ -0.37
PDE6DO43924 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.71□□□□□ -0.37
PDE6DO43924 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.71□□□□□ -0.37
PDE6DO43924 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
PDE6DO43924 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.71□□□□□ -0.37
PDE6DO43924 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PDE6DO43924 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PDE6DO43924 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
PDE6DO43924 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PDE6DO43924 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.71□□□□□ -0.38
PDE6DO43924 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
PDE6DO43924 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PDE6DO43924 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.71□□□□□ -0.38
PDE6DO43924 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
PDE6DO43924 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PDE6DO43924 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
PDE6DO43924 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
PDE6DO43924 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms