Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
SLC28A2O43868 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
SLC28A2O43868 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.81■□□□□ 0.12
SLC28A2O43868 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC28A2O43868 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A2O43868 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A2O43868 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SLC28A2O43868 RN7SL692P-201ENST00000464677 288 ntBASIC15.81■□□□□ 0.12
SLC28A2O43868 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC28A2O43868 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC28A2O43868 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A2O43868 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC28A2O43868 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC28A2O43868 AL590787.1-201ENST00000568856 1315 ntBASIC15.81■□□□□ 0.12
SLC28A2O43868 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC28A2O43868 AL606495.2-201ENST00000605867 535 ntBASIC15.81■□□□□ 0.12
SLC28A2O43868 AL662844.4-201ENST00000606367 2838 ntBASIC15.81■□□□□ 0.12
SLC28A2O43868 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC28A2O43868 AC046158.3-201ENST00000624947 2558 ntBASIC15.81■□□□□ 0.12
SLC28A2O43868 AC025048.6-201ENST00000634326 1161 ntBASIC15.81■□□□□ 0.12
SLC28A2O43868 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SLC28A2O43868 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A2O43868 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
SLC28A2O43868 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC28A2O43868 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A2O43868 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A2O43868 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A2O43868 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A2O43868 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC28A2O43868 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A2O43868 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A2O43868 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A2O43868 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A2O43868 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A2O43868 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SLC28A2O43868 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A2O43868 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SLC28A2O43868 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A2O43868 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A2O43868 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A2O43868 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A2O43868 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC28A2O43868 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC28A2O43868 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.8■□□□□ 0.12
SLC28A2O43868 FO538757.1-201ENST00000623083 1397 ntBASIC15.8■□□□□ 0.12
SLC28A2O43868 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC28A2O43868 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A2O43868 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A2O43868 KRT18P32-201ENST00000424695 1287 ntBASIC15.8■□□□□ 0.12
SLC28A2O43868 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC28A2O43868 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC28A2O43868 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC28A2O43868 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC28A2O43868 AL596325.1-201ENST00000563991 1082 ntBASIC15.8■□□□□ 0.12
SLC28A2O43868 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.8■□□□□ 0.12
SLC28A2O43868 AC084346.2-201ENST00000607097 949 ntBASIC15.8■□□□□ 0.12
SLC28A2O43868 AC026120.1-201ENST00000611536 926 ntBASIC15.8■□□□□ 0.12
SLC28A2O43868 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A2O43868 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC28A2O43868 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.8■□□□□ 0.12
SLC28A2O43868 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC28A2O43868 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SLC28A2O43868 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A2O43868 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A2O43868 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC28A2O43868 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC28A2O43868 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC28A2O43868 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A2O43868 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC28A2O43868 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC28A2O43868 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC28A2O43868 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC28A2O43868 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC28A2O43868 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SLC28A2O43868 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC28A2O43868 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
SLC28A2O43868 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC28A2O43868 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
SLC28A2O43868 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC28A2O43868 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC28A2O43868 KRT8P49-201ENST00000604166 1432 ntBASIC15.79■□□□□ 0.12
SLC28A2O43868 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC28A2O43868 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SLC28A2O43868 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC28A2O43868 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC28A2O43868 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC28A2O43868 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC28A2O43868 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC28A2O43868 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC28A2O43868 ARSEP1-201ENST00000420443 635 ntBASIC15.79■□□□□ 0.12
SLC28A2O43868 TREML5P-201ENST00000421694 576 ntBASIC15.79■□□□□ 0.12
SLC28A2O43868 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC28A2O43868 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC28A2O43868 AC069335.1-201ENST00000489972 472 ntBASIC15.79■□□□□ 0.12
SLC28A2O43868 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
SLC28A2O43868 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.79■□□□□ 0.12
SLC28A2O43868 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.79■□□□□ 0.12
SLC28A2O43868 OR7E47P-204ENST00000575924 449 ntBASIC15.79■□□□□ 0.12
SLC28A2O43868 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SLC28A2O43868 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms