Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACTN4O43707 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.34■□□□□ 0.53
ACTN4O43707 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACTN4O43707 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACTN4O43707 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ACTN4O43707 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.34■□□□□ 0.53
ACTN4O43707 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACTN4O43707 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ACTN4O43707 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.33■□□□□ 0.53
ACTN4O43707 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ACTN4O43707 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.33■□□□□ 0.53
ACTN4O43707 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
ACTN4O43707 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ACTN4O43707 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ACTN4O43707 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.33■□□□□ 0.53
ACTN4O43707 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
ACTN4O43707 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ACTN4O43707 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ACTN4O43707 IL9RP2-201ENST00000423948 1312 ntBASIC18.33■□□□□ 0.53
ACTN4O43707 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ACTN4O43707 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.33■□□□□ 0.52
ACTN4O43707 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ACTN4O43707 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ACTN4O43707 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.33■□□□□ 0.52
ACTN4O43707 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ACTN4O43707 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ACTN4O43707 RPL13AP23-201ENST00000480739 586 ntBASIC18.33■□□□□ 0.52
ACTN4O43707 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.33■□□□□ 0.52
ACTN4O43707 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.33■□□□□ 0.52
ACTN4O43707 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.33■□□□□ 0.52
ACTN4O43707 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.33■□□□□ 0.52
ACTN4O43707 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.33■□□□□ 0.52
ACTN4O43707 AL589935.2-201ENST00000616471 1231 ntBASIC18.33■□□□□ 0.52
ACTN4O43707 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ACTN4O43707 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ACTN4O43707 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.33■□□□□ 0.52
ACTN4O43707 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ACTN4O43707 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ACTN4O43707 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.33■□□□□ 0.52
ACTN4O43707 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ACTN4O43707 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ACTN4O43707 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ACTN4O43707 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
ACTN4O43707 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ACTN4O43707 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACTN4O43707 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
ACTN4O43707 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
ACTN4O43707 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACTN4O43707 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACTN4O43707 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ACTN4O43707 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.32■□□□□ 0.52
ACTN4O43707 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ACTN4O43707 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACTN4O43707 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACTN4O43707 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACTN4O43707 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACTN4O43707 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
ACTN4O43707 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.32■□□□□ 0.52
ACTN4O43707 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.32■□□□□ 0.52
ACTN4O43707 AC120057.1-201ENST00000483947 663 ntBASIC18.32■□□□□ 0.52
ACTN4O43707 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ACTN4O43707 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.32■□□□□ 0.52
ACTN4O43707 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
ACTN4O43707 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACTN4O43707 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ACTN4O43707 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
ACTN4O43707 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACTN4O43707 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.32■□□□□ 0.52
ACTN4O43707 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACTN4O43707 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACTN4O43707 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ACTN4O43707 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.32■□□□□ 0.52
ACTN4O43707 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACTN4O43707 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
ACTN4O43707 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.32■□□□□ 0.52
ACTN4O43707 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.32■□□□□ 0.52
ACTN4O43707 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.31■□□□□ 0.52
ACTN4O43707 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ACTN4O43707 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ACTN4O43707 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
ACTN4O43707 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ACTN4O43707 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.31■□□□□ 0.52
ACTN4O43707 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.31■□□□□ 0.52
ACTN4O43707 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.31■□□□□ 0.52
ACTN4O43707 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ACTN4O43707 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ACTN4O43707 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ACTN4O43707 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
ACTN4O43707 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ACTN4O43707 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
ACTN4O43707 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.31■□□□□ 0.52
ACTN4O43707 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ACTN4O43707 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ACTN4O43707 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ACTN4O43707 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ACTN4O43707 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.31■□□□□ 0.52
ACTN4O43707 FDX1P1-201ENST00000449115 551 ntBASIC18.31■□□□□ 0.52
ACTN4O43707 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.31■□□□□ 0.52
ACTN4O43707 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.31■□□□□ 0.52
ACTN4O43707 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms