Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHGDHO43175 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.31■□□□□ 0.2
PHGDHO43175 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.31■□□□□ 0.2
PHGDHO43175 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PHGDHO43175 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHGDHO43175 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PHGDHO43175 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.31■□□□□ 0.2
PHGDHO43175 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHGDHO43175 AC112504.1-201ENST00000623415 1841 ntBASIC16.31■□□□□ 0.2
PHGDHO43175 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.31■□□□□ 0.2
PHGDHO43175 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHGDHO43175 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.31■□□□□ 0.2
PHGDHO43175 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PHGDHO43175 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PHGDHO43175 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHGDHO43175 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHGDHO43175 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
PHGDHO43175 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PHGDHO43175 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PHGDHO43175 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHGDHO43175 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHGDHO43175 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.31■□□□□ 0.2
PHGDHO43175 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHGDHO43175 AL031284.1-201ENST00000419297 478 ntBASIC16.31■□□□□ 0.2
PHGDHO43175 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.31■□□□□ 0.2
PHGDHO43175 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHGDHO43175 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.31■□□□□ 0.2
PHGDHO43175 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PHGDHO43175 AL513480.1-201ENST00000451731 511 ntBASIC16.31■□□□□ 0.2
PHGDHO43175 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHGDHO43175 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.31■□□□□ 0.2
PHGDHO43175 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PHGDHO43175 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHGDHO43175 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.31■□□□□ 0.2
PHGDHO43175 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHGDHO43175 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
PHGDHO43175 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.31■□□□□ 0.2
PHGDHO43175 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHGDHO43175 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHGDHO43175 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PHGDHO43175 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.31■□□□□ 0.2
PHGDHO43175 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHGDHO43175 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHGDHO43175 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.3■□□□□ 0.2
PHGDHO43175 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHGDHO43175 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHGDHO43175 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHGDHO43175 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHGDHO43175 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.3■□□□□ 0.2
PHGDHO43175 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.3■□□□□ 0.2
PHGDHO43175 AL592424.1-201ENST00000563624 1536 ntBASIC16.3■□□□□ 0.2
PHGDHO43175 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHGDHO43175 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHGDHO43175 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PHGDHO43175 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHGDHO43175 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHGDHO43175 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHGDHO43175 AC004870.1-201ENST00000315132 882 ntBASIC16.3■□□□□ 0.2
PHGDHO43175 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHGDHO43175 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHGDHO43175 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.3■□□□□ 0.2
PHGDHO43175 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PHGDHO43175 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.3■□□□□ 0.2
PHGDHO43175 IGLL3P-201ENST00000412472 434 ntBASIC16.3■□□□□ 0.2
PHGDHO43175 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHGDHO43175 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.3■□□□□ 0.2
PHGDHO43175 PRSS29P-201ENST00000440800 595 ntBASIC16.3■□□□□ 0.2
PHGDHO43175 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.3■□□□□ 0.2
PHGDHO43175 AP002469.2-201ENST00000531724 424 ntBASIC16.3■□□□□ 0.2
PHGDHO43175 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.3■□□□□ 0.2
PHGDHO43175 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PHGDHO43175 AL773604.1-201ENST00000617417 272 ntBASIC16.3■□□□□ 0.2
PHGDHO43175 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
PHGDHO43175 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHGDHO43175 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHGDHO43175 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHGDHO43175 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHGDHO43175 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHGDHO43175 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PHGDHO43175 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.3■□□□□ 0.2
PHGDHO43175 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHGDHO43175 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHGDHO43175 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PHGDHO43175 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PHGDHO43175 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHGDHO43175 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHGDHO43175 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
PHGDHO43175 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PHGDHO43175 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PHGDHO43175 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHGDHO43175 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.29■□□□□ 0.2
PHGDHO43175 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHGDHO43175 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.29■□□□□ 0.2
PHGDHO43175 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHGDHO43175 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHGDHO43175 AP005117.1-202ENST00000581724 1908 ntBASIC16.29■□□□□ 0.2
PHGDHO43175 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHGDHO43175 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PHGDHO43175 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.29■□□□□ 0.2
PHGDHO43175 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms