Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC21.5■■□□□ 1.03
PIK3C2AO00443 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PIK3C2AO00443 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PIK3C2AO00443 MGST3-203ENST00000367885 680 ntTSL 2 BASIC21.5■■□□□ 1.03
PIK3C2AO00443 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PIK3C2AO00443 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PIK3C2AO00443 KRT18P43-201ENST00000469825 1281 ntBASIC21.5■■□□□ 1.03
PIK3C2AO00443 AC099548.2-209ENST00000480264 625 ntBASIC21.5■■□□□ 1.03
PIK3C2AO00443 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC21.5■■□□□ 1.03
PIK3C2AO00443 AP001889.1-201ENST00000525414 633 ntBASIC21.5■■□□□ 1.03
PIK3C2AO00443 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PIK3C2AO00443 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PIK3C2AO00443 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC21.5■■□□□ 1.03
PIK3C2AO00443 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PIK3C2AO00443 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PIK3C2AO00443 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PIK3C2AO00443 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.5■■□□□ 1.03
PIK3C2AO00443 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
PIK3C2AO00443 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC21.5■■□□□ 1.03
PIK3C2AO00443 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PIK3C2AO00443 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PIK3C2AO00443 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PIK3C2AO00443 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PIK3C2AO00443 AL121723.1-201ENST00000445194 1519 ntBASIC21.5■■□□□ 1.03
PIK3C2AO00443 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC21.5■■□□□ 1.03
PIK3C2AO00443 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PIK3C2AO00443 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PIK3C2AO00443 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PIK3C2AO00443 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PIK3C2AO00443 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC21.5■■□□□ 1.03
PIK3C2AO00443 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC21.5■■□□□ 1.03
PIK3C2AO00443 RPL7P3-201ENST00000441388 714 ntBASIC21.5■■□□□ 1.03
PIK3C2AO00443 KLF2P4-201ENST00000451959 1225 ntBASIC21.5■■□□□ 1.03
PIK3C2AO00443 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PIK3C2AO00443 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PIK3C2AO00443 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC21.5■■□□□ 1.03
PIK3C2AO00443 CLUHP6-201ENST00000580789 941 ntBASIC21.5■■□□□ 1.03
PIK3C2AO00443 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
PIK3C2AO00443 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC21.5■■□□□ 1.03
PIK3C2AO00443 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC21.5■■□□□ 1.03
PIK3C2AO00443 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PIK3C2AO00443 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PIK3C2AO00443 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PIK3C2AO00443 ME2P1-201ENST00000426028 1970 ntBASIC21.49■■□□□ 1.03
PIK3C2AO00443 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PIK3C2AO00443 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PIK3C2AO00443 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC21.49■■□□□ 1.03
PIK3C2AO00443 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PIK3C2AO00443 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PIK3C2AO00443 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PIK3C2AO00443 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PIK3C2AO00443 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PIK3C2AO00443 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PIK3C2AO00443 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PIK3C2AO00443 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PIK3C2AO00443 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC21.49■■□□□ 1.03
PIK3C2AO00443 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC21.49■■□□□ 1.03
PIK3C2AO00443 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC21.49■■□□□ 1.03
PIK3C2AO00443 PTP4A1P2-201ENST00000546033 454 ntBASIC21.49■■□□□ 1.03
PIK3C2AO00443 AC009542.2-202ENST00000619004 1067 ntBASIC21.49■■□□□ 1.03
PIK3C2AO00443 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PIK3C2AO00443 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PIK3C2AO00443 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
PIK3C2AO00443 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC21.48■■□□□ 1.03
PIK3C2AO00443 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
PIK3C2AO00443 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PIK3C2AO00443 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PIK3C2AO00443 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PIK3C2AO00443 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC21.48■■□□□ 1.03
PIK3C2AO00443 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC21.48■■□□□ 1.03
PIK3C2AO00443 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC21.48■■□□□ 1.03
PIK3C2AO00443 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC21.48■■□□□ 1.03
PIK3C2AO00443 TP73-209ENST00000603362 1668 ntTSL 5 BASIC21.48■■□□□ 1.03
PIK3C2AO00443 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PIK3C2AO00443 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC21.48■■□□□ 1.03
PIK3C2AO00443 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PIK3C2AO00443 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC21.48■■□□□ 1.03
PIK3C2AO00443 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PIK3C2AO00443 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PIK3C2AO00443 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
PIK3C2AO00443 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PIK3C2AO00443 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PIK3C2AO00443 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PIK3C2AO00443 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PIK3C2AO00443 AC134915.1-201ENST00000426461 574 ntBASIC21.47■■□□□ 1.03
PIK3C2AO00443 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
PIK3C2AO00443 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
PIK3C2AO00443 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC21.47■■□□□ 1.03
PIK3C2AO00443 RIT1-205ENST00000539040 919 ntTSL 2 BASIC21.47■■□□□ 1.03
PIK3C2AO00443 AL450472.2-201ENST00000603663 1156 ntBASIC21.47■■□□□ 1.03
PIK3C2AO00443 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PIK3C2AO00443 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC21.47■■□□□ 1.03
PIK3C2AO00443 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PIK3C2AO00443 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PIK3C2AO00443 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PIK3C2AO00443 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PIK3C2AO00443 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PIK3C2AO00443 ALOX12P2-203ENST00000570921 1945 ntBASIC21.47■■□□□ 1.03
PIK3C2AO00443 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PIK3C2AO00443 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms