Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLIC1O00299 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLIC1O00299 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLIC1O00299 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CLIC1O00299 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLIC1O00299 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CLIC1O00299 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.45■□□□□ 0.06
CLIC1O00299 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CLIC1O00299 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.45■□□□□ 0.06
CLIC1O00299 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.45■□□□□ 0.06
CLIC1O00299 FAM185BP-201ENST00000443595 716 ntBASIC15.45■□□□□ 0.06
CLIC1O00299 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
CLIC1O00299 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.45■□□□□ 0.06
CLIC1O00299 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.45■□□□□ 0.06
CLIC1O00299 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLIC1O00299 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.45■□□□□ 0.06
CLIC1O00299 AC021097.1-201ENST00000607902 574 ntBASIC15.45■□□□□ 0.06
CLIC1O00299 ACTL9-202ENST00000612068 1252 ntBASIC15.45■□□□□ 0.06
CLIC1O00299 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CLIC1O00299 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.45■□□□□ 0.06
CLIC1O00299 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CLIC1O00299 AC004790.2-201ENST00000623588 572 ntBASIC15.45■□□□□ 0.06
CLIC1O00299 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLIC1O00299 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLIC1O00299 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CLIC1O00299 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CLIC1O00299 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLIC1O00299 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CLIC1O00299 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLIC1O00299 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLIC1O00299 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLIC1O00299 AP002414.3-201ENST00000589352 1468 ntBASIC15.45■□□□□ 0.06
CLIC1O00299 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLIC1O00299 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLIC1O00299 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLIC1O00299 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLIC1O00299 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLIC1O00299 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLIC1O00299 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.44■□□□□ 0.06
CLIC1O00299 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CLIC1O00299 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLIC1O00299 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLIC1O00299 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLIC1O00299 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLIC1O00299 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CLIC1O00299 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLIC1O00299 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
CLIC1O00299 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.44■□□□□ 0.06
CLIC1O00299 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLIC1O00299 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.44■□□□□ 0.06
CLIC1O00299 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLIC1O00299 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CLIC1O00299 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CLIC1O00299 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLIC1O00299 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLIC1O00299 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CLIC1O00299 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLIC1O00299 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLIC1O00299 RNU1-129P-201ENST00000384064 167 ntBASIC15.44■□□□□ 0.06
CLIC1O00299 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLIC1O00299 AC108073.2-201ENST00000464002 357 ntBASIC15.44■□□□□ 0.06
CLIC1O00299 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CLIC1O00299 U1.21-201ENST00000580816 167 ntBASIC15.44■□□□□ 0.06
CLIC1O00299 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CLIC1O00299 AC012313.10-201ENST00000623509 926 ntBASIC15.44■□□□□ 0.06
CLIC1O00299 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLIC1O00299 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLIC1O00299 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLIC1O00299 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLIC1O00299 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLIC1O00299 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CLIC1O00299 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLIC1O00299 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLIC1O00299 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CLIC1O00299 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLIC1O00299 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLIC1O00299 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.44■□□□□ 0.06
CLIC1O00299 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLIC1O00299 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.43■□□□□ 0.06
CLIC1O00299 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.43■□□□□ 0.06
CLIC1O00299 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLIC1O00299 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.43■□□□□ 0.06
CLIC1O00299 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLIC1O00299 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CLIC1O00299 DBET-201ENST00000630918 3363 ntBASIC15.43■□□□□ 0.06
CLIC1O00299 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLIC1O00299 NORAD-201ENST00000565493 5339 ntBASIC15.43■□□□□ 0.06
CLIC1O00299 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.43■□□□□ 0.06
CLIC1O00299 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLIC1O00299 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLIC1O00299 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CLIC1O00299 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLIC1O00299 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLIC1O00299 HMGA1P7-201ENST00000406908 502 ntBASIC15.43■□□□□ 0.06
CLIC1O00299 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.43■□□□□ 0.06
CLIC1O00299 HNRNPDP1-201ENST00000439535 754 ntBASIC15.43■□□□□ 0.06
CLIC1O00299 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.43■□□□□ 0.06
CLIC1O00299 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.43■□□□□ 0.06
CLIC1O00299 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.43■□□□□ 0.06
CLIC1O00299 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms