Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.18■□□□□ 0.18
TLR4O00206 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TLR4O00206 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.18■□□□□ 0.18
TLR4O00206 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.18■□□□□ 0.18
TLR4O00206 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 BANF1P1-201ENST00000553684 263 ntBASIC16.18■□□□□ 0.18
TLR4O00206 AL079307.3-201ENST00000556114 283 ntBASIC16.18■□□□□ 0.18
TLR4O00206 AL596325.1-201ENST00000563991 1082 ntBASIC16.18■□□□□ 0.18
TLR4O00206 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.18■□□□□ 0.18
TLR4O00206 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.18■□□□□ 0.18
TLR4O00206 AL133215.2-201ENST00000609242 977 ntBASIC16.18■□□□□ 0.18
TLR4O00206 AL844908.2-201ENST00000609461 460 ntBASIC16.18■□□□□ 0.18
TLR4O00206 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 FER1L4-210ENST00000615531 5998 ntBASIC16.18■□□□□ 0.18
TLR4O00206 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TLR4O00206 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.18■□□□□ 0.18
TLR4O00206 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.18■□□□□ 0.18
TLR4O00206 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
TLR4O00206 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TLR4O00206 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TLR4O00206 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TLR4O00206 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TLR4O00206 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TLR4O00206 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TLR4O00206 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TLR4O00206 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.17■□□□□ 0.18
TLR4O00206 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TLR4O00206 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.17■□□□□ 0.18
TLR4O00206 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TLR4O00206 NME2P1-201ENST00000426182 414 ntBASIC16.17■□□□□ 0.18
TLR4O00206 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.17■□□□□ 0.18
TLR4O00206 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.17■□□□□ 0.18
TLR4O00206 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TLR4O00206 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TLR4O00206 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TLR4O00206 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.17■□□□□ 0.18
TLR4O00206 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TLR4O00206 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
TLR4O00206 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.17■□□□□ 0.18
TLR4O00206 AC008738.7-201ENST00000609744 511 ntBASIC16.17■□□□□ 0.18
TLR4O00206 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TLR4O00206 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TLR4O00206 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TLR4O00206 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TLR4O00206 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TLR4O00206 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TLR4O00206 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.17■□□□□ 0.18
TLR4O00206 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TLR4O00206 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.17■□□□□ 0.18
TLR4O00206 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TLR4O00206 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TLR4O00206 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.17■□□□□ 0.18
TLR4O00206 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TLR4O00206 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TLR4O00206 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TLR4O00206 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
TLR4O00206 AC018695.7-201ENST00000624587 2492 ntBASIC16.17■□□□□ 0.18
TLR4O00206 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TLR4O00206 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TLR4O00206 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.16■□□□□ 0.18
TLR4O00206 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TLR4O00206 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TLR4O00206 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TLR4O00206 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TLR4O00206 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TLR4O00206 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TLR4O00206 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TLR4O00206 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TLR4O00206 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TLR4O00206 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.16■□□□□ 0.18
TLR4O00206 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.16■□□□□ 0.18
TLR4O00206 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
TLR4O00206 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TLR4O00206 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
TLR4O00206 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
TLR4O00206 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.16■□□□□ 0.18
TLR4O00206 RN7SL692P-201ENST00000464677 288 ntBASIC16.16■□□□□ 0.18
TLR4O00206 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.16■□□□□ 0.18
TLR4O00206 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.16■□□□□ 0.18
TLR4O00206 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.16■□□□□ 0.18
TLR4O00206 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.16■□□□□ 0.18
TLR4O00206 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TLR4O00206 AC020765.3-201ENST00000613051 740 ntBASIC16.16■□□□□ 0.18
TLR4O00206 UBALD1-205ENST00000590891 2641 ntBASIC16.16■□□□□ 0.18
TLR4O00206 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TLR4O00206 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TLR4O00206 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TLR4O00206 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TLR4O00206 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms