Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.38■□□□□ 0.21
CFAP99D6REC4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CFAP99D6REC4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CFAP99D6REC4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.38■□□□□ 0.21
CFAP99D6REC4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFAP99D6REC4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CFAP99D6REC4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.38■□□□□ 0.21
CFAP99D6REC4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.38■□□□□ 0.21
CFAP99D6REC4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFAP99D6REC4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CFAP99D6REC4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CFAP99D6REC4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CFAP99D6REC4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.38■□□□□ 0.21
CFAP99D6REC4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFAP99D6REC4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CFAP99D6REC4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CFAP99D6REC4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFAP99D6REC4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.38■□□□□ 0.21
CFAP99D6REC4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFAP99D6REC4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.37■□□□□ 0.21
CFAP99D6REC4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CFAP99D6REC4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CFAP99D6REC4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CFAP99D6REC4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.37■□□□□ 0.21
CFAP99D6REC4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.37■□□□□ 0.21
CFAP99D6REC4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CFAP99D6REC4 AC016027.1-202ENST00000607927 1699 ntBASIC16.37■□□□□ 0.21
CFAP99D6REC4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.37■□□□□ 0.21
CFAP99D6REC4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CFAP99D6REC4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CFAP99D6REC4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CFAP99D6REC4 AC092171.3-201ENST00000610122 2651 ntBASIC16.37■□□□□ 0.21
CFAP99D6REC4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CFAP99D6REC4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CFAP99D6REC4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.37■□□□□ 0.21
CFAP99D6REC4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CFAP99D6REC4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.37■□□□□ 0.21
CFAP99D6REC4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CFAP99D6REC4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.37■□□□□ 0.21
CFAP99D6REC4 RN7SL589P-201ENST00000481268 310 ntBASIC16.37■□□□□ 0.21
CFAP99D6REC4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.37■□□□□ 0.21
CFAP99D6REC4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.37■□□□□ 0.21
CFAP99D6REC4 AC092865.5-201ENST00000545435 363 ntBASIC16.37■□□□□ 0.21
CFAP99D6REC4 AC005829.1-201ENST00000570002 483 ntBASIC16.37■□□□□ 0.21
CFAP99D6REC4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CFAP99D6REC4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
CFAP99D6REC4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.37■□□□□ 0.21
CFAP99D6REC4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.37■□□□□ 0.21
CFAP99D6REC4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CFAP99D6REC4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CFAP99D6REC4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.37■□□□□ 0.21
CFAP99D6REC4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.37■□□□□ 0.21
CFAP99D6REC4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.37■□□□□ 0.21
CFAP99D6REC4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CFAP99D6REC4 AKAP8P1-201ENST00000434743 1349 ntBASIC16.37■□□□□ 0.21
CFAP99D6REC4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CFAP99D6REC4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CFAP99D6REC4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.37■□□□□ 0.21
CFAP99D6REC4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CFAP99D6REC4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CFAP99D6REC4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CFAP99D6REC4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CFAP99D6REC4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
CFAP99D6REC4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP99D6REC4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.36■□□□□ 0.21
CFAP99D6REC4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP99D6REC4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP99D6REC4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP99D6REC4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CFAP99D6REC4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.36■□□□□ 0.21
CFAP99D6REC4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.36■□□□□ 0.21
CFAP99D6REC4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP99D6REC4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP99D6REC4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP99D6REC4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.36■□□□□ 0.21
CFAP99D6REC4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CFAP99D6REC4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP99D6REC4 AL355306.1-201ENST00000415580 579 ntBASIC16.36■□□□□ 0.21
CFAP99D6REC4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.36■□□□□ 0.21
CFAP99D6REC4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.36■□□□□ 0.21
CFAP99D6REC4 AL671277.1-201ENST00000429656 993 ntBASIC16.36■□□□□ 0.21
CFAP99D6REC4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP99D6REC4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP99D6REC4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.36■□□□□ 0.21
CFAP99D6REC4 POU5F1P6-201ENST00000466990 990 ntBASIC16.36■□□□□ 0.21
CFAP99D6REC4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP99D6REC4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.36■□□□□ 0.21
CFAP99D6REC4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.36■□□□□ 0.21
CFAP99D6REC4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CFAP99D6REC4 AC099522.2-201ENST00000607001 744 ntBASIC16.36■□□□□ 0.21
CFAP99D6REC4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP99D6REC4 AC092902.6-201ENST00000641783 218 ntBASIC16.36■□□□□ 0.21
CFAP99D6REC4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.36■□□□□ 0.21
CFAP99D6REC4 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP99D6REC4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.36■□□□□ 0.21
CFAP99D6REC4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.36■□□□□ 0.21
CFAP99D6REC4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP99D6REC4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFAP99D6REC4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CFAP99D6REC4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms