Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00473A8K010 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00473A8K010 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00473A8K010 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00473A8K010 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00473A8K010 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
LINC00473A8K010 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00473A8K010 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
LINC00473A8K010 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00473A8K010 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00473A8K010 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00473A8K010 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00473A8K010 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00473A8K010 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00473A8K010 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00473A8K010 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00473A8K010 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00473A8K010 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LINC00473A8K010 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00473A8K010 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LINC00473A8K010 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LINC00473A8K010 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00473A8K010 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00473A8K010 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00473A8K010 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00473A8K010 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00473A8K010 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00473A8K010 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00473A8K010 CRYGEP-201ENST00000412192 528 ntBASIC13.32□□□□□ -0.28
LINC00473A8K010 HCG4B-203ENST00000450128 991 ntBASIC13.32□□□□□ -0.28
LINC00473A8K010 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00473A8K010 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC00473A8K010 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LINC00473A8K010 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00473A8K010 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LINC00473A8K010 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00473A8K010 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00473A8K010 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00473A8K010 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00473A8K010 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00473A8K010 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LINC00473A8K010 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00473A8K010 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00473A8K010 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00473A8K010 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00473A8K010 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00473A8K010 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00473A8K010 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LINC00473A8K010 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00473A8K010 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00473A8K010 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00473A8K010 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00473A8K010 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00473A8K010 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LINC00473A8K010 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LINC00473A8K010 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.31□□□□□ -0.28
LINC00473A8K010 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LINC00473A8K010 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00473A8K010 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00473A8K010 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LINC00473A8K010 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00473A8K010 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
LINC00473A8K010 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00473A8K010 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
LINC00473A8K010 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00473A8K010 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00473A8K010 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00473A8K010 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.31□□□□□ -0.28
LINC00473A8K010 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LINC00473A8K010 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00473A8K010 FAAHP1-202ENST00000446499 1238 ntBASIC13.31□□□□□ -0.28
LINC00473A8K010 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00473A8K010 RNA5SP419-201ENST00000515908 135 ntBASIC13.31□□□□□ -0.28
LINC00473A8K010 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
LINC00473A8K010 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms