Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 SPTLC1P5-201ENST00000450718 252 ntBASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 SUPT4H1P2-201ENST00000501248 353 ntBASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 RN7SL555P-201ENST00000584742 339 ntBASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 AC132938.4-201ENST00000623835 848 ntBASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
TMEM88BA6NKF7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 AC098818.2-201ENST00000564925 2320 ntBASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 AC009113.1-201ENST00000570267 2443 ntBASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 AC069218.1-201ENST00000435269 762 ntBASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 AC124947.2-201ENST00000547118 1133 ntBASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88BA6NKF7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 AL512652.2-201ENST00000625156 1716 ntBASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 DIO1-215ENST00000610607 796 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 REXO1L8P-201ENST00000604378 1897 ntBASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM88BA6NKF7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 GPAA1P2-202ENST00000606848 1787 ntBASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 ABALON-201ENST00000629058 1903 ntBASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 Z97180.1-201ENST00000445173 988 ntBASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 MIR3147-201ENST00000577811 66 ntBASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 AL139011.1-202ENST00000642063 584 ntBASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM88BA6NKF7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms