Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 AC026979.3-201ENST00000607315 403 ntBASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 AL512652.2-201ENST00000625156 1716 ntBASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSNK1G3Q9Y6M4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 AL080243.2-201ENST00000418783 582 ntBASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 AL589702.1-201ENST00000641229 1509 ntBASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CSNK1G3Q9Y6M4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 AL162727.3-201ENST00000635661 2787 ntBASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1G3Q9Y6M4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms