Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 MIR1199-201ENST00000621445 119 ntBASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 HNRNPRP1-201ENST00000453465 1695 ntBASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 PI4KAP1-204ENST00000612579 1703 ntBASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 AP002490.2-201ENST00000524791 560 ntBASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 TERC-201ENST00000602385 541 ntBASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 AL391256.1-201ENST00000443260 1855 ntBASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 AC243591.1-201ENST00000452967 1364 ntBASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.03□□□□□ -0.48
HHLA3Q9XRX5 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HHLA3Q9XRX5 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.48
HHLA3Q9XRX5 AP002414.2-201ENST00000591780 3365 ntBASIC12.02□□□□□ -0.48
HHLA3Q9XRX5 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HHLA3Q9XRX5 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.02□□□□□ -0.48
HHLA3Q9XRX5 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.02□□□□□ -0.48
HHLA3Q9XRX5 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.02□□□□□ -0.48
HHLA3Q9XRX5 SNX18-202ENST00000343017 3140 ntBASIC12.02□□□□□ -0.48
HHLA3Q9XRX5 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
HHLA3Q9XRX5 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
HHLA3Q9XRX5 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HHLA3Q9XRX5 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.48
HHLA3Q9XRX5 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
HHLA3Q9XRX5 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.02□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms