Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 AL513523.2-202ENST00000427283 2040 ntBASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 AC026691.1-201ENST00000602502 2017 ntBASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHA4Q9UN74 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.64■□□□□ 0.58
PCDHA4Q9UN74 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 AC245100.5-201ENST00000452108 331 ntBASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHA4Q9UN74 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 MIR648-201ENST00000385046 94 ntBASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 SPDYE14P-201ENST00000442619 822 ntBASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 AC026150.2-201ENST00000564693 1156 ntBASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHA4Q9UN74 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms