Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.64■□□□□ 0.9
SCN11AQ9UI33 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SCN11AQ9UI33 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC20.64■□□□□ 0.9
SCN11AQ9UI33 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SCN11AQ9UI33 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
SCN11AQ9UI33 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC20.64■□□□□ 0.9
SCN11AQ9UI33 AC000095.1-201ENST00000603208 874 ntBASIC20.64■□□□□ 0.9
SCN11AQ9UI33 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC20.64■□□□□ 0.9
SCN11AQ9UI33 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC20.64■□□□□ 0.9
SCN11AQ9UI33 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC20.64■□□□□ 0.9
SCN11AQ9UI33 CU634019.7-201ENST00000624153 1185 ntBASIC20.64■□□□□ 0.9
SCN11AQ9UI33 FP236241.2-201ENST00000624906 1185 ntBASIC20.64■□□□□ 0.9
SCN11AQ9UI33 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SCN11AQ9UI33 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
SCN11AQ9UI33 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SCN11AQ9UI33 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCN11AQ9UI33 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SCN11AQ9UI33 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCN11AQ9UI33 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SCN11AQ9UI33 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCN11AQ9UI33 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCN11AQ9UI33 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCN11AQ9UI33 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SCN11AQ9UI33 HAUS4P1-201ENST00000406739 1145 ntBASIC20.64■□□□□ 0.89
SCN11AQ9UI33 SOCS2P1-201ENST00000417727 557 ntBASIC20.64■□□□□ 0.89
SCN11AQ9UI33 AC104989.1-201ENST00000519711 778 ntBASIC20.64■□□□□ 0.89
SCN11AQ9UI33 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC20.64■□□□□ 0.89
SCN11AQ9UI33 CMC2-214ENST00000565925 640 ntTSL 5 BASIC20.64■□□□□ 0.89
SCN11AQ9UI33 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC20.64■□□□□ 0.89
SCN11AQ9UI33 AC107373.2-201ENST00000607735 490 ntBASIC20.64■□□□□ 0.89
SCN11AQ9UI33 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCN11AQ9UI33 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCN11AQ9UI33 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.64■□□□□ 0.89
SCN11AQ9UI33 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCN11AQ9UI33 KRT8P22-201ENST00000562317 1415 ntBASIC20.62■□□□□ 0.89
SCN11AQ9UI33 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 AC006449.6-201ENST00000612330 2296 ntBASIC20.62■□□□□ 0.89
SCN11AQ9UI33 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 AL121723.1-201ENST00000445194 1519 ntBASIC20.62■□□□□ 0.89
SCN11AQ9UI33 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 AC005229.1-201ENST00000392885 409 ntBASIC20.62■□□□□ 0.89
SCN11AQ9UI33 AGGF1P2-201ENST00000426656 2106 ntBASIC20.62■□□□□ 0.89
SCN11AQ9UI33 BNIP3P42-201ENST00000454982 569 ntBASIC20.62■□□□□ 0.89
SCN11AQ9UI33 KRT18P43-201ENST00000469825 1281 ntBASIC20.62■□□□□ 0.89
SCN11AQ9UI33 FTH1P14-201ENST00000482930 551 ntBASIC20.62■□□□□ 0.89
SCN11AQ9UI33 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 BNIP3P29-201ENST00000598302 571 ntBASIC20.62■□□□□ 0.89
SCN11AQ9UI33 AC011447.5-201ENST00000616168 564 ntBASIC20.62■□□□□ 0.89
SCN11AQ9UI33 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 AC022211.2-201ENST00000585075 2527 ntBASIC20.62■□□□□ 0.89
SCN11AQ9UI33 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SCN11AQ9UI33 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms