Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
EBF1Q9UH73 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EBF1Q9UH73 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.67■□□□□ 0.26
EBF1Q9UH73 FAM220BP-201ENST00000377689 816 ntBASIC16.67■□□□□ 0.26
EBF1Q9UH73 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EBF1Q9UH73 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
EBF1Q9UH73 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.67■□□□□ 0.26
EBF1Q9UH73 AL353779.1-201ENST00000434793 351 ntBASIC16.67■□□□□ 0.26
EBF1Q9UH73 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.67■□□□□ 0.26
EBF1Q9UH73 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.67■□□□□ 0.26
EBF1Q9UH73 PRYP6-201ENST00000514804 343 ntBASIC16.67■□□□□ 0.26
EBF1Q9UH73 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EBF1Q9UH73 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.67■□□□□ 0.26
EBF1Q9UH73 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EBF1Q9UH73 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.67■□□□□ 0.26
EBF1Q9UH73 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.67■□□□□ 0.26
EBF1Q9UH73 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.67■□□□□ 0.26
EBF1Q9UH73 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.67■□□□□ 0.26
EBF1Q9UH73 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.67■□□□□ 0.26
EBF1Q9UH73 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EBF1Q9UH73 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.67■□□□□ 0.26
EBF1Q9UH73 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EBF1Q9UH73 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
EBF1Q9UH73 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.67■□□□□ 0.26
EBF1Q9UH73 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EBF1Q9UH73 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EBF1Q9UH73 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EBF1Q9UH73 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EBF1Q9UH73 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EBF1Q9UH73 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
EBF1Q9UH73 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EBF1Q9UH73 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
EBF1Q9UH73 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
EBF1Q9UH73 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EBF1Q9UH73 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
EBF1Q9UH73 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 CROCCP2-202ENST00000412962 2773 ntBASIC16.66■□□□□ 0.26
EBF1Q9UH73 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.66■□□□□ 0.26
EBF1Q9UH73 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 TEX28P1-201ENST00000613479 1221 ntBASIC16.66■□□□□ 0.26
EBF1Q9UH73 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 TEX28P2-201ENST00000617764 1221 ntBASIC16.66■□□□□ 0.26
EBF1Q9UH73 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF1Q9UH73 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
EBF1Q9UH73 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EBF1Q9UH73 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
EBF1Q9UH73 CETN4P-206ENST00000642099 2168 ntBASIC16.65■□□□□ 0.26
EBF1Q9UH73 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
EBF1Q9UH73 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EBF1Q9UH73 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EBF1Q9UH73 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EBF1Q9UH73 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
EBF1Q9UH73 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EBF1Q9UH73 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
EBF1Q9UH73 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms