Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
COMMD9Q9P000 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD9Q9P000 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.03□□□□□ -0.16
COMMD9Q9P000 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD9Q9P000 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD9Q9P000 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
COMMD9Q9P000 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD9Q9P000 TSPY22P-201ENST00000427496 604 ntBASIC14.03□□□□□ -0.16
COMMD9Q9P000 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.03□□□□□ -0.16
COMMD9Q9P000 RN7SL606P-201ENST00000472779 293 ntBASIC14.03□□□□□ -0.16
COMMD9Q9P000 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD9Q9P000 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD9Q9P000 AC011840.4-201ENST00000578471 627 ntBASIC14.03□□□□□ -0.16
COMMD9Q9P000 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.03□□□□□ -0.16
COMMD9Q9P000 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
COMMD9Q9P000 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
COMMD9Q9P000 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD9Q9P000 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD9Q9P000 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD9Q9P000 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
COMMD9Q9P000 GPR89P-201ENST00000407924 1495 ntBASIC14.03□□□□□ -0.16
COMMD9Q9P000 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD9Q9P000 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.03□□□□□ -0.16
COMMD9Q9P000 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
COMMD9Q9P000 AC023157.3-201ENST00000619086 2088 ntBASIC14.03□□□□□ -0.16
COMMD9Q9P000 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD9Q9P000 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
COMMD9Q9P000 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.03□□□□□ -0.16
COMMD9Q9P000 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
COMMD9Q9P000 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
COMMD9Q9P000 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
COMMD9Q9P000 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COMMD9Q9P000 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.02□□□□□ -0.16
COMMD9Q9P000 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
COMMD9Q9P000 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COMMD9Q9P000 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
COMMD9Q9P000 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
COMMD9Q9P000 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COMMD9Q9P000 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
COMMD9Q9P000 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.02□□□□□ -0.16
COMMD9Q9P000 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.02□□□□□ -0.16
COMMD9Q9P000 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
COMMD9Q9P000 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
COMMD9Q9P000 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
COMMD9Q9P000 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.02□□□□□ -0.16
COMMD9Q9P000 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
COMMD9Q9P000 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.02□□□□□ -0.16
COMMD9Q9P000 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.02□□□□□ -0.17
COMMD9Q9P000 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD9Q9P000 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD9Q9P000 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD9Q9P000 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD9Q9P000 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD9Q9P000 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD9Q9P000 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD9Q9P000 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
COMMD9Q9P000 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.02□□□□□ -0.17
COMMD9Q9P000 AC246785.2-201ENST00000432512 513 ntBASIC14.02□□□□□ -0.17
COMMD9Q9P000 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
COMMD9Q9P000 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.02□□□□□ -0.17
COMMD9Q9P000 AL671277.2-201ENST00000458060 996 ntBASIC14.02□□□□□ -0.17
COMMD9Q9P000 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD9Q9P000 AC063952.2-201ENST00000498792 1227 ntBASIC14.02□□□□□ -0.17
COMMD9Q9P000 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.02□□□□□ -0.17
COMMD9Q9P000 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.02□□□□□ -0.17
COMMD9Q9P000 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
COMMD9Q9P000 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD9Q9P000 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.02□□□□□ -0.17
COMMD9Q9P000 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
COMMD9Q9P000 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.02□□□□□ -0.17
COMMD9Q9P000 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.02□□□□□ -0.17
COMMD9Q9P000 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
COMMD9Q9P000 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.02□□□□□ -0.17
COMMD9Q9P000 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
COMMD9Q9P000 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
COMMD9Q9P000 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD9Q9P000 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.02□□□□□ -0.17
COMMD9Q9P000 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD9Q9P000 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD9Q9P000 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.02□□□□□ -0.17
COMMD9Q9P000 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD9Q9P000 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
COMMD9Q9P000 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD9Q9P000 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.02□□□□□ -0.17
COMMD9Q9P000 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
COMMD9Q9P000 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.02□□□□□ -0.17
COMMD9Q9P000 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD9Q9P000 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
COMMD9Q9P000 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
COMMD9Q9P000 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.01□□□□□ -0.17
COMMD9Q9P000 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
COMMD9Q9P000 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.01□□□□□ -0.17
COMMD9Q9P000 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 AL353593.2-201ENST00000602529 1483 ntBASIC14.01□□□□□ -0.17
COMMD9Q9P000 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms