Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 AL513523.2-202ENST00000427283 2040 ntBASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 RNA5SP410-201ENST00000516285 106 ntBASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 ALG1L8P-201ENST00000533887 760 ntBASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ECHDC1Q9NTX5 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 RBPMS2P1-201ENST00000437762 623 ntBASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 AC245100.5-201ENST00000452108 331 ntBASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ECHDC1Q9NTX5 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 MIR648-201ENST00000385046 94 ntBASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 SPDYE14P-201ENST00000442619 822 ntBASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 AC026150.2-201ENST00000564693 1156 ntBASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms