Protein–RNA interactions for Protein: Q9NSC5

HOMER3, Homer protein homolog 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3Q9NSC5 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 AL592424.1-201ENST00000563624 1536 ntBASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 AC021087.4-201ENST00000563761 564 ntBASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 PGM5P2-202ENST00000637225 1043 ntBASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 DBET-201ENST00000630918 3363 ntBASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.12■□□□□ 0.33
HOMER3Q9NSC5 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 AC067930.6-201ENST00000623257 4947 ntBASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 KRT18P27-201ENST00000427733 1299 ntBASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 SAPCD2P3-201ENST00000455031 850 ntBASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 AC136632.2-201ENST00000512891 861 ntBASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 AC008667.4-201ENST00000607370 168 ntBASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOMER3Q9NSC5 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
HOMER3Q9NSC5 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.1■□□□□ 0.33
HOMER3Q9NSC5 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.1■□□□□ 0.33
HOMER3Q9NSC5 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.1■□□□□ 0.33
HOMER3Q9NSC5 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOMER3Q9NSC5 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
HOMER3Q9NSC5 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.1■□□□□ 0.33
HOMER3Q9NSC5 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HOMER3Q9NSC5 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOMER3Q9NSC5 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOMER3Q9NSC5 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.1■□□□□ 0.33
HOMER3Q9NSC5 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
HOMER3Q9NSC5 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOMER3Q9NSC5 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOMER3Q9NSC5 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.1■□□□□ 0.33
HOMER3Q9NSC5 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HOMER3Q9NSC5 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOMER3Q9NSC5 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms