Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 DBET-201ENST00000630918 3363 ntBASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 LAGE3P1-201ENST00000425356 484 ntBASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 RPS15P9-201ENST00000494093 319 ntBASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 AC073347.1-201ENST00000421633 2643 ntBASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 AC144831.1-201ENST00000573312 2656 ntBASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 KRT18P31-201ENST00000506277 1292 ntBASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 AC025062.2-201ENST00000605477 670 ntBASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 ANKRD26P3-201ENST00000454044 2748 ntBASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CDC42SE2Q9NRR3 AC012569.1-201ENST00000591191 1524 ntBASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms