Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.26■□□□□ 0.35
TLR9Q9NR96 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
TLR9Q9NR96 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.26■□□□□ 0.35
TLR9Q9NR96 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TLR9Q9NR96 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.26■□□□□ 0.35
TLR9Q9NR96 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.26■□□□□ 0.35
TLR9Q9NR96 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.26■□□□□ 0.35
TLR9Q9NR96 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TLR9Q9NR96 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.26■□□□□ 0.35
TLR9Q9NR96 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TLR9Q9NR96 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.26■□□□□ 0.35
TLR9Q9NR96 RRP7BP-205ENST00000566851 833 ntBASIC17.26■□□□□ 0.35
TLR9Q9NR96 AC092337.1-201ENST00000568699 1129 ntBASIC17.26■□□□□ 0.35
TLR9Q9NR96 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.26■□□□□ 0.35
TLR9Q9NR96 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.26■□□□□ 0.35
TLR9Q9NR96 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TLR9Q9NR96 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TLR9Q9NR96 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
TLR9Q9NR96 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TLR9Q9NR96 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TLR9Q9NR96 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TLR9Q9NR96 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TLR9Q9NR96 AC084018.2-201ENST00000613093 2607 ntBASIC17.26■□□□□ 0.35
TLR9Q9NR96 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TLR9Q9NR96 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR9Q9NR96 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR9Q9NR96 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TLR9Q9NR96 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TLR9Q9NR96 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TLR9Q9NR96 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR9Q9NR96 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR9Q9NR96 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR9Q9NR96 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TLR9Q9NR96 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR9Q9NR96 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR9Q9NR96 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR9Q9NR96 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TLR9Q9NR96 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.25■□□□□ 0.35
TLR9Q9NR96 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TLR9Q9NR96 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.25■□□□□ 0.35
TLR9Q9NR96 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
TLR9Q9NR96 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.25■□□□□ 0.35
TLR9Q9NR96 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.25■□□□□ 0.35
TLR9Q9NR96 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.25■□□□□ 0.35
TLR9Q9NR96 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.25■□□□□ 0.35
TLR9Q9NR96 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR9Q9NR96 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.25■□□□□ 0.35
TLR9Q9NR96 WFDC1-204ENST00000613603 549 ntBASIC17.25■□□□□ 0.35
TLR9Q9NR96 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.25■□□□□ 0.35
TLR9Q9NR96 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.25■□□□□ 0.35
TLR9Q9NR96 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TLR9Q9NR96 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TLR9Q9NR96 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.25■□□□□ 0.35
TLR9Q9NR96 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.25■□□□□ 0.35
TLR9Q9NR96 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.25■□□□□ 0.35
TLR9Q9NR96 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
TLR9Q9NR96 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TLR9Q9NR96 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TLR9Q9NR96 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR9Q9NR96 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR9Q9NR96 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR9Q9NR96 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TLR9Q9NR96 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TLR9Q9NR96 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.24■□□□□ 0.35
TLR9Q9NR96 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR9Q9NR96 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR9Q9NR96 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR9Q9NR96 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.24■□□□□ 0.35
TLR9Q9NR96 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.24■□□□□ 0.35
TLR9Q9NR96 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.24■□□□□ 0.35
TLR9Q9NR96 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.24■□□□□ 0.35
TLR9Q9NR96 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.24■□□□□ 0.35
TLR9Q9NR96 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.24■□□□□ 0.35
TLR9Q9NR96 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.24■□□□□ 0.35
TLR9Q9NR96 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.24■□□□□ 0.35
TLR9Q9NR96 TIMM17BP1-201ENST00000545713 516 ntBASIC17.24■□□□□ 0.35
TLR9Q9NR96 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
TLR9Q9NR96 AP005482.1-201ENST00000563722 1273 ntBASIC17.24■□□□□ 0.35
TLR9Q9NR96 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.24■□□□□ 0.35
TLR9Q9NR96 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TLR9Q9NR96 AC074044.1-201ENST00000609673 707 ntBASIC17.24■□□□□ 0.35
TLR9Q9NR96 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.24■□□□□ 0.35
TLR9Q9NR96 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR9Q9NR96 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.24■□□□□ 0.35
TLR9Q9NR96 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.24■□□□□ 0.35
TLR9Q9NR96 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR9Q9NR96 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR9Q9NR96 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR9Q9NR96 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
TLR9Q9NR96 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR9Q9NR96 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR9Q9NR96 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR9Q9NR96 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR9Q9NR96 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TLR9Q9NR96 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TLR9Q9NR96 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.24■□□□□ 0.35
TLR9Q9NR96 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TLR9Q9NR96 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR9Q9NR96 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.23■□□□□ 0.35
TLR9Q9NR96 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms