Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS4Q9NQG7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.92■□□□□ 0.3
HPS4Q9NQG7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 RNA5SP410-201ENST00000516285 106 ntBASIC16.92■□□□□ 0.3
HPS4Q9NQG7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 AC004233.3-201ENST00000607794 1269 ntBASIC16.92■□□□□ 0.3
HPS4Q9NQG7 AL133215.2-201ENST00000609242 977 ntBASIC16.92■□□□□ 0.3
HPS4Q9NQG7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 AC011270.2-201ENST00000624293 2550 ntBASIC16.92■□□□□ 0.3
HPS4Q9NQG7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 AC087499.5-201ENST00000452760 1342 ntBASIC16.92■□□□□ 0.3
HPS4Q9NQG7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HPS4Q9NQG7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 AL596325.1-201ENST00000563991 1082 ntBASIC16.91■□□□□ 0.3
HPS4Q9NQG7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 AC027307.3-201ENST00000594262 1100 ntBASIC16.91■□□□□ 0.3
HPS4Q9NQG7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS4Q9NQG7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms