Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.37□□□□□ -0.11
ELL3Q9HB65 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.37□□□□□ -0.11
ELL3Q9HB65 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ELL3Q9HB65 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.37□□□□□ -0.11
ELL3Q9HB65 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.37□□□□□ -0.11
ELL3Q9HB65 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.37□□□□□ -0.11
ELL3Q9HB65 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 RPS2P1-201ENST00000434010 821 ntBASIC14.37□□□□□ -0.11
ELL3Q9HB65 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.37□□□□□ -0.11
ELL3Q9HB65 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
ELL3Q9HB65 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 AC073648.2-201ENST00000510116 352 ntBASIC14.37□□□□□ -0.11
ELL3Q9HB65 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.37□□□□□ -0.11
ELL3Q9HB65 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.37□□□□□ -0.11
ELL3Q9HB65 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.37□□□□□ -0.11
ELL3Q9HB65 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ELL3Q9HB65 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.37□□□□□ -0.11
ELL3Q9HB65 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.37□□□□□ -0.11
ELL3Q9HB65 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.37□□□□□ -0.11
ELL3Q9HB65 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
ELL3Q9HB65 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ELL3Q9HB65 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ELL3Q9HB65 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ELL3Q9HB65 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ELL3Q9HB65 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ELL3Q9HB65 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ELL3Q9HB65 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ELL3Q9HB65 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ELL3Q9HB65 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.36□□□□□ -0.11
ELL3Q9HB65 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ELL3Q9HB65 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ELL3Q9HB65 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 TPM4P1-201ENST00000436100 807 ntBASIC14.36□□□□□ -0.11
ELL3Q9HB65 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 PRYP5-201ENST00000451909 266 ntBASIC14.36□□□□□ -0.11
ELL3Q9HB65 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ELL3Q9HB65 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ELL3Q9HB65 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ELL3Q9HB65 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ELL3Q9HB65 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ELL3Q9HB65 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ELL3Q9HB65 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ELL3Q9HB65 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ELL3Q9HB65 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ELL3Q9HB65 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ELL3Q9HB65 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ELL3Q9HB65 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ELL3Q9HB65 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ELL3Q9HB65 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ELL3Q9HB65 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ELL3Q9HB65 AP002414.2-201ENST00000591780 3365 ntBASIC14.36□□□□□ -0.11
ELL3Q9HB65 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.35□□□□□ -0.11
ELL3Q9HB65 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ELL3Q9HB65 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
ELL3Q9HB65 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.35□□□□□ -0.11
ELL3Q9HB65 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.35□□□□□ -0.11
ELL3Q9HB65 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ELL3Q9HB65 AL162727.3-201ENST00000635661 2787 ntBASIC14.35□□□□□ -0.11
ELL3Q9HB65 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ELL3Q9HB65 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ELL3Q9HB65 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
ELL3Q9HB65 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ELL3Q9HB65 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ELL3Q9HB65 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ELL3Q9HB65 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms