Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 PDPK2P-202ENST00000562415 1191 ntBASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 AC068137.2-201ENST00000605408 478 ntBASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.64■□□□□ 0.26
LRRC40Q9H9A6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 MIR648-201ENST00000385046 94 ntBASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 AC093724.1-201ENST00000448659 1027 ntBASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 AC120114.3-201ENST00000611923 658 ntBASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 AC016027.1-202ENST00000607927 1699 ntBASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 AL162727.3-201ENST00000635661 2787 ntBASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LRRC40Q9H9A6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 MED15P5-201ENST00000423150 992 ntBASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 AC074386.1-202ENST00000463561 864 ntBASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 SLC25A1P1-201ENST00000528351 927 ntBASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 AC106730.1-201ENST00000566722 1090 ntBASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 AC027601.4-201ENST00000611259 610 ntBASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 AL161645.1-201ENST00000622716 1255 ntBASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC40Q9H9A6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms