Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 AC009090.5-201ENST00000624886 2285 ntBASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 FAM197Y4-202ENST00000622692 608 ntBASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 AC243591.1-201ENST00000452967 1364 ntBASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 AC148477.4-201ENST00000613430 1793 ntBASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLIRPQ9GZT3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 HBZP1-201ENST00000354915 429 ntBASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.4□□□□□ -0.1
SLIRPQ9GZT3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
SLIRPQ9GZT3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
SLIRPQ9GZT3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms