Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO3Q9BXY4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO3Q9BXY4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.99□□□□□ -0.01
RSPO3Q9BXY4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO3Q9BXY4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 AC093909.1-201ENST00000504731 1122 ntBASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 AC007064.4-201ENST00000637740 555 ntBASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 AC023824.1-201ENST00000562945 2975 ntBASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RSPO3Q9BXY4 AC009090.5-201ENST00000624886 2285 ntBASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 KRT18P34-201ENST00000488218 1270 ntBASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO3Q9BXY4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 AC134407.2-201ENST00000625089 1978 ntBASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO3Q9BXY4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms