Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 CD99-202ENST00000381180 530 ntTSL 2 BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 MIR4515-201ENST00000584082 81 ntBASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 AC008735.5-201ENST00000623544 497 ntBASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHANK2-AS3Q9BTD1 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 AC103702.1-201ENST00000548801 2630 ntBASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 AC105339.3-201ENST00000560043 636 ntBASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 AL356488.2-201ENST00000602755 427 ntBASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 AC005593.1-201ENST00000624894 515 ntBASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 AC022532.1-201ENST00000624563 1728 ntBASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
SHANK2-AS3Q9BTD1 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms