Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 AC140658.5-201ENST00000438532 169 ntBASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 AC091167.2-201ENST00000579581 588 ntBASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 KRT8P49-201ENST00000604166 1432 ntBASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 AC079328.2-201ENST00000561241 3354 ntBASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 AC131009.4-201ENST00000624048 1740 ntBASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 TIMM8BP1-201ENST00000452384 211 ntBASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 DUX4L17-201ENST00000557360 1267 ntBASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 AC087641.1-201ENST00000557561 1021 ntBASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 AC007950.2-201ENST00000615045 2347 ntBASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 AC063926.3-201ENST00000624734 5658 ntBASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCGF1Q9BSM1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 AL671277.1-201ENST00000429656 993 ntBASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.78□□□□□ -0.2
PCGF1Q9BSM1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms