Protein–RNA interactions for Protein: Q9BQY4

RHOXF2, Rhox homeobox family member 2, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2Q9BQY4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RHOXF2Q9BQY4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
RHOXF2Q9BQY4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.3■□□□□ 0.36
RHOXF2Q9BQY4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RHOXF2Q9BQY4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 PMPCAP1-201ENST00000508114 1576 ntBASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 MIR648-201ENST00000385046 94 ntBASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 TMBIM7P-203ENST00000641617 1718 ntBASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RHOXF2Q9BQY4 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 TOP3BP1-201ENST00000420768 1380 ntBASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 TSPY22P-201ENST00000427496 604 ntBASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 SPDYE13P-201ENST00000445314 798 ntBASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 AC091607.1-201ENST00000490318 1060 ntBASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 IGHV3-41-201ENST00000613121 348 ntBASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 AC092919.2-201ENST00000623631 1645 ntBASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.28■□□□□ 0.36
RHOXF2Q9BQY4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHOXF2Q9BQY4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHOXF2Q9BQY4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RHOXF2Q9BQY4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHOXF2Q9BQY4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms