Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VGLL1Q99990 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
VGLL1Q99990 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VGLL1Q99990 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.48□□□□□ -0.41
VGLL1Q99990 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
VGLL1Q99990 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
VGLL1Q99990 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VGLL1Q99990 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
VGLL1Q99990 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
VGLL1Q99990 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
VGLL1Q99990 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.48□□□□□ -0.41
VGLL1Q99990 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC12.48□□□□□ -0.41
VGLL1Q99990 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.48□□□□□ -0.41
VGLL1Q99990 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VGLL1Q99990 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VGLL1Q99990 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
VGLL1Q99990 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
VGLL1Q99990 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VGLL1Q99990 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VGLL1Q99990 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VGLL1Q99990 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VGLL1Q99990 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VGLL1Q99990 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC12.48□□□□□ -0.41
VGLL1Q99990 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.48□□□□□ -0.41
VGLL1Q99990 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.48□□□□□ -0.41
VGLL1Q99990 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.48□□□□□ -0.41
VGLL1Q99990 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.48□□□□□ -0.41
VGLL1Q99990 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.48□□□□□ -0.41
VGLL1Q99990 AC091167.2-201ENST00000579581 588 ntBASIC12.48□□□□□ -0.41
VGLL1Q99990 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.48□□□□□ -0.41
VGLL1Q99990 CYP2A7P1-201ENST00000595391 815 ntBASIC12.48□□□□□ -0.41
VGLL1Q99990 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.48□□□□□ -0.41
VGLL1Q99990 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VGLL1Q99990 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VGLL1Q99990 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
VGLL1Q99990 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC12.48□□□□□ -0.41
VGLL1Q99990 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VGLL1Q99990 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VGLL1Q99990 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VGLL1Q99990 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.48□□□□□ -0.41
VGLL1Q99990 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VGLL1Q99990 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.48□□□□□ -0.41
VGLL1Q99990 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VGLL1Q99990 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VGLL1Q99990 SLC22A20-204ENST00000530038 1673 ntBASIC12.48□□□□□ -0.41
VGLL1Q99990 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VGLL1Q99990 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VGLL1Q99990 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VGLL1Q99990 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VGLL1Q99990 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.47□□□□□ -0.41
VGLL1Q99990 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.47□□□□□ -0.41
VGLL1Q99990 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VGLL1Q99990 DBET-201ENST00000630918 3363 ntBASIC12.47□□□□□ -0.41
VGLL1Q99990 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.47□□□□□ -0.41
VGLL1Q99990 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.47□□□□□ -0.41
VGLL1Q99990 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VGLL1Q99990 PRAL-201ENST00000624952 3286 ntBASIC12.47□□□□□ -0.41
VGLL1Q99990 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VGLL1Q99990 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VGLL1Q99990 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VGLL1Q99990 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.47□□□□□ -0.41
VGLL1Q99990 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VGLL1Q99990 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VGLL1Q99990 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VGLL1Q99990 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
VGLL1Q99990 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
VGLL1Q99990 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VGLL1Q99990 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VGLL1Q99990 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
VGLL1Q99990 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VGLL1Q99990 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
VGLL1Q99990 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
VGLL1Q99990 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
VGLL1Q99990 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VGLL1Q99990 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
VGLL1Q99990 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
VGLL1Q99990 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VGLL1Q99990 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VGLL1Q99990 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.47□□□□□ -0.41
VGLL1Q99990 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC12.47□□□□□ -0.41
VGLL1Q99990 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
VGLL1Q99990 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC12.47□□□□□ -0.41
VGLL1Q99990 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
VGLL1Q99990 POU5F1P6-201ENST00000466990 990 ntBASIC12.47□□□□□ -0.41
VGLL1Q99990 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
VGLL1Q99990 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.47□□□□□ -0.41
VGLL1Q99990 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
VGLL1Q99990 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC12.47□□□□□ -0.41
VGLL1Q99990 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.47□□□□□ -0.41
VGLL1Q99990 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC12.47□□□□□ -0.41
VGLL1Q99990 SDCCAG3P1-201ENST00000589292 1150 ntBASIC12.47□□□□□ -0.41
VGLL1Q99990 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.47□□□□□ -0.41
VGLL1Q99990 MTDHP4-201ENST00000600287 670 ntBASIC12.47□□□□□ -0.41
VGLL1Q99990 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC12.47□□□□□ -0.41
VGLL1Q99990 AC004706.3-202ENST00000621574 984 ntBASIC12.47□□□□□ -0.41
VGLL1Q99990 AC093458.2-201ENST00000623150 629 ntBASIC12.47□□□□□ -0.41
VGLL1Q99990 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.47□□□□□ -0.41
VGLL1Q99990 AF228730.7-201ENST00000641842 219 ntBASIC12.47□□□□□ -0.41
VGLL1Q99990 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
VGLL1Q99990 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms