Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LITAFQ99732 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LITAFQ99732 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.66
LITAFQ99732 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC10.9□□□□□ -0.66
LITAFQ99732 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC10.9□□□□□ -0.66
LITAFQ99732 ARHGAP23P1-201ENST00000562773 1937 ntBASIC10.9□□□□□ -0.66
LITAFQ99732 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
LITAFQ99732 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LITAFQ99732 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LITAFQ99732 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LITAFQ99732 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LITAFQ99732 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
LITAFQ99732 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LITAFQ99732 PEX7-202ENST00000367756 680 ntTSL 3 BASIC10.9□□□□□ -0.66
LITAFQ99732 MDFI-202ENST00000373050 809 ntTSL 2 BASIC10.9□□□□□ -0.66
LITAFQ99732 AL845331.1-201ENST00000424978 1190 ntBASIC10.9□□□□□ -0.66
LITAFQ99732 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LITAFQ99732 LINC01238-205ENST00000567549 1107 ntBASIC10.9□□□□□ -0.66
LITAFQ99732 RNF126P1-202ENST00000569893 925 ntBASIC10.9□□□□□ -0.66
LITAFQ99732 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LITAFQ99732 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC10.9□□□□□ -0.66
LITAFQ99732 HADH-212ENST00000638621 741 ntTSL 5 BASIC10.9□□□□□ -0.66
LITAFQ99732 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
LITAFQ99732 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
LITAFQ99732 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LITAFQ99732 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC10.9□□□□□ -0.66
LITAFQ99732 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LITAFQ99732 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LITAFQ99732 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC10.9□□□□□ -0.66
LITAFQ99732 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LITAFQ99732 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
LITAFQ99732 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.67
LITAFQ99732 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC10.9□□□□□ -0.67
LITAFQ99732 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
LITAFQ99732 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
LITAFQ99732 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
LITAFQ99732 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LITAFQ99732 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
LITAFQ99732 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
LITAFQ99732 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
LITAFQ99732 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC10.9□□□□□ -0.67
LITAFQ99732 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC10.89□□□□□ -0.67
LITAFQ99732 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC10.89□□□□□ -0.67
LITAFQ99732 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC10.89□□□□□ -0.67
LITAFQ99732 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
LITAFQ99732 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC10.89□□□□□ -0.67
LITAFQ99732 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC10.89□□□□□ -0.67
LITAFQ99732 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC10.89□□□□□ -0.67
LITAFQ99732 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC10.89□□□□□ -0.67
LITAFQ99732 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
LITAFQ99732 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC10.89□□□□□ -0.67
LITAFQ99732 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC10.89□□□□□ -0.67
LITAFQ99732 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 STARP1-201ENST00000397973 869 ntBASIC10.89□□□□□ -0.67
LITAFQ99732 CTNS-203ENST00000399306 803 ntTSL 3 BASIC10.89□□□□□ -0.67
LITAFQ99732 LINC00982-205ENST00000420957 435 ntBASIC10.89□□□□□ -0.67
LITAFQ99732 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
LITAFQ99732 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC10.89□□□□□ -0.67
LITAFQ99732 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC10.89□□□□□ -0.67
LITAFQ99732 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
LITAFQ99732 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
LITAFQ99732 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC10.89□□□□□ -0.67
LITAFQ99732 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 AC020765.3-201ENST00000613051 740 ntBASIC10.89□□□□□ -0.67
LITAFQ99732 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 OS9-207ENST00000439210 1946 ntTSL 2 BASIC10.89□□□□□ -0.67
LITAFQ99732 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
LITAFQ99732 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
LITAFQ99732 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC10.89□□□□□ -0.67
LITAFQ99732 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms