Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPENQ96T58 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPENQ96T58 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPENQ96T58 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.5□□□□□ -0.09
SPENQ96T58 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPENQ96T58 AC006033.1-201ENST00000440505 426 ntBASIC14.5□□□□□ -0.09
SPENQ96T58 RPL13P2-201ENST00000440687 659 ntBASIC14.5□□□□□ -0.09
SPENQ96T58 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPENQ96T58 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
SPENQ96T58 KRT90P-201ENST00000549264 1064 ntBASIC14.5□□□□□ -0.09
SPENQ96T58 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.5□□□□□ -0.09
SPENQ96T58 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SPENQ96T58 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SPENQ96T58 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SPENQ96T58 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.49□□□□□ -0.09
SPENQ96T58 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SPENQ96T58 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SPENQ96T58 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPENQ96T58 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SPENQ96T58 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SPENQ96T58 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPENQ96T58 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.49□□□□□ -0.09
SPENQ96T58 ELK2AP-201ENST00000392510 1007 ntBASIC14.49□□□□□ -0.09
SPENQ96T58 FXNP2-201ENST00000411625 547 ntBASIC14.49□□□□□ -0.09
SPENQ96T58 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.49□□□□□ -0.09
SPENQ96T58 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.49□□□□□ -0.09
SPENQ96T58 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPENQ96T58 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.49□□□□□ -0.09
SPENQ96T58 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.49□□□□□ -0.09
SPENQ96T58 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPENQ96T58 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPENQ96T58 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPENQ96T58 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.49□□□□□ -0.09
SPENQ96T58 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.49□□□□□ -0.09
SPENQ96T58 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.49□□□□□ -0.09
SPENQ96T58 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SPENQ96T58 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.49□□□□□ -0.09
SPENQ96T58 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.49□□□□□ -0.09
SPENQ96T58 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.49□□□□□ -0.09
SPENQ96T58 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SPENQ96T58 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.49□□□□□ -0.09
SPENQ96T58 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPENQ96T58 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPENQ96T58 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPENQ96T58 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SPENQ96T58 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.49□□□□□ -0.09
SPENQ96T58 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPENQ96T58 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SPENQ96T58 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
SPENQ96T58 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.48□□□□□ -0.09
SPENQ96T58 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.48□□□□□ -0.09
SPENQ96T58 AC068587.3-201ENST00000526613 355 ntBASIC14.48□□□□□ -0.09
SPENQ96T58 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.48□□□□□ -0.09
SPENQ96T58 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.48□□□□□ -0.09
SPENQ96T58 FLJ38576-201ENST00000623820 2459 ntBASIC14.48□□□□□ -0.09
SPENQ96T58 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPENQ96T58 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.48□□□□□ -0.09
SPENQ96T58 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
SPENQ96T58 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SPENQ96T58 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.48□□□□□ -0.09
SPENQ96T58 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SPENQ96T58 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SPENQ96T58 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.48□□□□□ -0.09
SPENQ96T58 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPENQ96T58 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SPENQ96T58 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPENQ96T58 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.48□□□□□ -0.09
SPENQ96T58 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPENQ96T58 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SPENQ96T58 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPENQ96T58 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPENQ96T58 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SPENQ96T58 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
SPENQ96T58 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.48□□□□□ -0.09
SPENQ96T58 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
SPENQ96T58 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SPENQ96T58 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SPENQ96T58 AC018735.1-201ENST00000437208 1502 ntBASIC14.48□□□□□ -0.09
SPENQ96T58 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SPENQ96T58 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
SPENQ96T58 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPENQ96T58 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPENQ96T58 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.48□□□□□ -0.09
SPENQ96T58 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SPENQ96T58 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.48□□□□□ -0.09
SPENQ96T58 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPENQ96T58 MEP1AP4-201ENST00000423244 1087 ntBASIC14.48□□□□□ -0.09
SPENQ96T58 AC007551.1-201ENST00000457394 519 ntBASIC14.48□□□□□ -0.09
SPENQ96T58 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.48□□□□□ -0.09
SPENQ96T58 AC036164.1-201ENST00000570544 333 ntBASIC14.48□□□□□ -0.09
SPENQ96T58 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.48□□□□□ -0.09
SPENQ96T58 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.48□□□□□ -0.09
SPENQ96T58 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPENQ96T58 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPENQ96T58 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.48□□□□□ -0.09
SPENQ96T58 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SPENQ96T58 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SPENQ96T58 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SPENQ96T58 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
SPENQ96T58 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms