Protein–RNA interactions for Protein: Q96P50

ACAP3, Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3Q96P50 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
ACAP3Q96P50 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ACAP3Q96P50 TREML5P-201ENST00000421694 576 ntBASIC17.72■□□□□ 0.43
ACAP3Q96P50 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ACAP3Q96P50 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ACAP3Q96P50 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
ACAP3Q96P50 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ACAP3Q96P50 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.72■□□□□ 0.43
ACAP3Q96P50 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.72■□□□□ 0.43
ACAP3Q96P50 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.72■□□□□ 0.43
ACAP3Q96P50 AL390955.2-201ENST00000603032 514 ntBASIC17.72■□□□□ 0.43
ACAP3Q96P50 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ACAP3Q96P50 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.72■□□□□ 0.43
ACAP3Q96P50 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ACAP3Q96P50 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
ACAP3Q96P50 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
ACAP3Q96P50 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ACAP3Q96P50 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.72■□□□□ 0.43
ACAP3Q96P50 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ACAP3Q96P50 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ACAP3Q96P50 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
ACAP3Q96P50 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
ACAP3Q96P50 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.72■□□□□ 0.43
ACAP3Q96P50 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ACAP3Q96P50 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ACAP3Q96P50 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
ACAP3Q96P50 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ACAP3Q96P50 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACAP3Q96P50 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACAP3Q96P50 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.71■□□□□ 0.43
ACAP3Q96P50 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ACAP3Q96P50 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.71■□□□□ 0.43
ACAP3Q96P50 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACAP3Q96P50 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACAP3Q96P50 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACAP3Q96P50 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.71■□□□□ 0.43
ACAP3Q96P50 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.71■□□□□ 0.43
ACAP3Q96P50 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACAP3Q96P50 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACAP3Q96P50 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.71■□□□□ 0.43
ACAP3Q96P50 AL035456.1-201ENST00000456064 1369 ntBASIC17.71■□□□□ 0.43
ACAP3Q96P50 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACAP3Q96P50 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACAP3Q96P50 FO538757.1-201ENST00000623083 1397 ntBASIC17.71■□□□□ 0.43
ACAP3Q96P50 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACAP3Q96P50 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.71■□□□□ 0.43
ACAP3Q96P50 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.71■□□□□ 0.43
ACAP3Q96P50 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.71■□□□□ 0.43
ACAP3Q96P50 AC061975.2-201ENST00000581722 295 ntBASIC17.71■□□□□ 0.43
ACAP3Q96P50 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ACAP3Q96P50 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.71■□□□□ 0.43
ACAP3Q96P50 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.71■□□□□ 0.43
ACAP3Q96P50 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACAP3Q96P50 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACAP3Q96P50 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACAP3Q96P50 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACAP3Q96P50 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ACAP3Q96P50 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ACAP3Q96P50 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACAP3Q96P50 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.71■□□□□ 0.43
ACAP3Q96P50 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.71■□□□□ 0.43
ACAP3Q96P50 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
ACAP3Q96P50 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.71■□□□□ 0.42
ACAP3Q96P50 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
ACAP3Q96P50 ALOX12P2-203ENST00000570921 1945 ntBASIC17.7■□□□□ 0.42
ACAP3Q96P50 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ACAP3Q96P50 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
ACAP3Q96P50 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ACAP3Q96P50 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ACAP3Q96P50 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.7■□□□□ 0.42
ACAP3Q96P50 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ACAP3Q96P50 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ACAP3Q96P50 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.7■□□□□ 0.42
ACAP3Q96P50 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ACAP3Q96P50 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.7■□□□□ 0.42
ACAP3Q96P50 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ACAP3Q96P50 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
ACAP3Q96P50 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ACAP3Q96P50 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.7■□□□□ 0.42
ACAP3Q96P50 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.7■□□□□ 0.42
ACAP3Q96P50 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.7■□□□□ 0.42
ACAP3Q96P50 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.7■□□□□ 0.42
ACAP3Q96P50 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.7■□□□□ 0.42
ACAP3Q96P50 AC011467.4-201ENST00000594891 528 ntBASIC17.7■□□□□ 0.42
ACAP3Q96P50 AL158211.3-201ENST00000607385 239 ntBASIC17.7■□□□□ 0.42
ACAP3Q96P50 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ACAP3Q96P50 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ACAP3Q96P50 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ACAP3Q96P50 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ACAP3Q96P50 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ACAP3Q96P50 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ACAP3Q96P50 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ACAP3Q96P50 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.7■□□□□ 0.42
ACAP3Q96P50 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.7■□□□□ 0.42
ACAP3Q96P50 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ACAP3Q96P50 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.7■□□□□ 0.42
ACAP3Q96P50 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ACAP3Q96P50 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ACAP3Q96P50 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ACAP3Q96P50 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms