Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC131009.4-201ENST00000624048 1740 ntBASIC16.92■□□□□ 0.3
C9orf72Q96LT7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 AP005117.1-202ENST00000581724 1908 ntBASIC16.92■□□□□ 0.3
C9orf72Q96LT7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.91■□□□□ 0.3
C9orf72Q96LT7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 AC098831.1-202ENST00000438821 336 ntBASIC16.91■□□□□ 0.3
C9orf72Q96LT7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 AC145285.3-201ENST00000564603 959 ntBASIC16.91■□□□□ 0.3
C9orf72Q96LT7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf72Q96LT7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 CDC14C-201ENST00000428251 1719 ntBASIC16.9■□□□□ 0.3
C9orf72Q96LT7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 AC104109.2-201ENST00000602919 1418 ntBASIC16.9■□□□□ 0.3
C9orf72Q96LT7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 SLC22A20-204ENST00000530038 1673 ntBASIC16.9■□□□□ 0.3
C9orf72Q96LT7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 AC073347.1-201ENST00000421633 2643 ntBASIC16.9■□□□□ 0.3
C9orf72Q96LT7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.9■□□□□ 0.3
C9orf72Q96LT7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
C9orf72Q96LT7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.89■□□□□ 0.3
C9orf72Q96LT7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
C9orf72Q96LT7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
C9orf72Q96LT7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
C9orf72Q96LT7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
C9orf72Q96LT7 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
C9orf72Q96LT7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.89■□□□□ 0.29
C9orf72Q96LT7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms