Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 MIR574-201ENST00000385209 96 ntBASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 AL355306.1-201ENST00000415580 579 ntBASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 GPX1P2-201ENST00000429271 606 ntBASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 PGAM5P1-201ENST00000518923 814 ntBASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 KRT18P58-201ENST00000527480 1120 ntBASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 AC008267.7-201ENST00000624570 1194 ntBASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 AC092902.6-201ENST00000641783 218 ntBASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
PDLIM5Q96HC4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PDLIM5Q96HC4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 TFAMP1-201ENST00000412727 736 ntBASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 AC004832.2-201ENST00000426397 482 ntBASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 ADH5P3-201ENST00000433842 1137 ntBASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 SPTSSB-204ENST00000617024 1292 ntBASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM5Q96HC4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 AC011477.6-201ENST00000604980 1927 ntBASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 AC023274.1-201ENST00000418278 595 ntBASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 ACTG1P14-201ENST00000446382 1122 ntBASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 AL135744.1-201ENST00000565098 629 ntBASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDLIM5Q96HC4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms