Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ATP2A3Q93084 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP2A3Q93084 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP2A3Q93084 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.27■□□□□ 0.36
ATP2A3Q93084 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP2A3Q93084 AC092171.3-201ENST00000610122 2651 ntBASIC17.27■□□□□ 0.36
ATP2A3Q93084 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ATP2A3Q93084 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP2A3Q93084 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP2A3Q93084 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP2A3Q93084 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP2A3Q93084 AC068587.6-202ENST00000641839 5619 ntBASIC17.27■□□□□ 0.36
ATP2A3Q93084 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP2A3Q93084 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
ATP2A3Q93084 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.27■□□□□ 0.36
ATP2A3Q93084 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP2A3Q93084 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.27■□□□□ 0.36
ATP2A3Q93084 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP2A3Q93084 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.27■□□□□ 0.36
ATP2A3Q93084 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ATP2A3Q93084 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.27■□□□□ 0.36
ATP2A3Q93084 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.27■□□□□ 0.36
ATP2A3Q93084 AC107890.1-201ENST00000422478 521 ntBASIC17.27■□□□□ 0.36
ATP2A3Q93084 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.27■□□□□ 0.36
ATP2A3Q93084 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.27■□□□□ 0.36
ATP2A3Q93084 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP2A3Q93084 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP2A3Q93084 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.27■□□□□ 0.36
ATP2A3Q93084 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.27■□□□□ 0.36
ATP2A3Q93084 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.27■□□□□ 0.36
ATP2A3Q93084 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.27■□□□□ 0.36
ATP2A3Q93084 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.27■□□□□ 0.36
ATP2A3Q93084 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP2A3Q93084 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.27■□□□□ 0.36
ATP2A3Q93084 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ATP2A3Q93084 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP2A3Q93084 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.27■□□□□ 0.35
ATP2A3Q93084 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ATP2A3Q93084 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.27■□□□□ 0.35
ATP2A3Q93084 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ATP2A3Q93084 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
ATP2A3Q93084 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ATP2A3Q93084 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.27■□□□□ 0.35
ATP2A3Q93084 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATP2A3Q93084 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.26■□□□□ 0.35
ATP2A3Q93084 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A3Q93084 DOC2GP-204ENST00000639052 2548 ntBASIC17.26■□□□□ 0.35
ATP2A3Q93084 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A3Q93084 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A3Q93084 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A3Q93084 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ATP2A3Q93084 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A3Q93084 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A3Q93084 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.26■□□□□ 0.35
ATP2A3Q93084 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A3Q93084 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A3Q93084 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A3Q93084 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A3Q93084 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A3Q93084 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
ATP2A3Q93084 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
ATP2A3Q93084 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A3Q93084 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ATP2A3Q93084 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.26■□□□□ 0.35
ATP2A3Q93084 BASP1P1-201ENST00000430708 665 ntBASIC17.26■□□□□ 0.35
ATP2A3Q93084 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.26■□□□□ 0.35
ATP2A3Q93084 AC026150.2-201ENST00000564693 1156 ntBASIC17.26■□□□□ 0.35
ATP2A3Q93084 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.26■□□□□ 0.35
ATP2A3Q93084 AJ011932.1-201ENST00000621707 465 ntBASIC17.26■□□□□ 0.35
ATP2A3Q93084 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.26■□□□□ 0.35
ATP2A3Q93084 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A3Q93084 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ATP2A3Q93084 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.26■□□□□ 0.35
ATP2A3Q93084 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
ATP2A3Q93084 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A3Q93084 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A3Q93084 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A3Q93084 FRMD8P1-201ENST00000440433 1524 ntBASIC17.26■□□□□ 0.35
ATP2A3Q93084 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.26■□□□□ 0.35
ATP2A3Q93084 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A3Q93084 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP2A3Q93084 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A3Q93084 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ATP2A3Q93084 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
ATP2A3Q93084 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A3Q93084 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A3Q93084 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.25■□□□□ 0.35
ATP2A3Q93084 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
ATP2A3Q93084 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A3Q93084 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A3Q93084 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A3Q93084 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ATP2A3Q93084 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A3Q93084 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A3Q93084 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ATP2A3Q93084 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.25■□□□□ 0.35
ATP2A3Q93084 MIR943-201ENST00000401286 94 ntBASIC17.25■□□□□ 0.35
ATP2A3Q93084 AC055876.3-201ENST00000431496 288 ntBASIC17.25■□□□□ 0.35
ATP2A3Q93084 SPDYE14P-201ENST00000442619 822 ntBASIC17.25■□□□□ 0.35
ATP2A3Q93084 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms