Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 AL049840.3-201ENST00000602669 611 ntBASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 AC107918.4-202ENST00000641623 219 ntBASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 AC132938.5-201ENST00000624980 1813 ntBASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.47□□□□□ -0.09
RAB40AQ8WXH6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 AC097637.2-201ENST00000624096 1997 ntBASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 AP002414.1-201ENST00000391405 1147 ntBASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 AP000347.1-202ENST00000435868 847 ntBASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 MIR7706-201ENST00000613747 67 ntBASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 AC116407.3-201ENST00000623905 1129 ntBASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB40AQ8WXH6 AC243591.1-201ENST00000452967 1364 ntBASIC14.46□□□□□ -0.1
RAB40AQ8WXH6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
RAB40AQ8WXH6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
RAB40AQ8WXH6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
RAB40AQ8WXH6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms