Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 NUP210P1-202ENST00000504322 710 ntBASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 AC044849.1-201ENST00000519737 1188 ntBASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 HSPB1P2-201ENST00000448722 546 ntBASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 RN7SL181P-201ENST00000462921 277 ntBASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 AC022137.2-201ENST00000503482 481 ntBASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 AF254983.2-201ENST00000612331 135 ntBASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 AC006453.4-201ENST00000636949 1252 ntBASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 AC104784.1-201ENST00000473096 294 ntBASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 RN7SL48P-201ENST00000579283 293 ntBASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 AC015818.8-201ENST00000587907 1519 ntBASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 APOA2-204ENST00000464492 530 ntTSL 3 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 RERG-205ENST00000537647 935 ntTSL 2 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 AC093813.1-201ENST00000605066 256 ntBASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC10.78□□□□□ -0.68
ALMS1Q8TCU4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
ALMS1Q8TCU4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
ALMS1Q8TCU4 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
ALMS1Q8TCU4 ACR-203ENST00000529621 708 ntTSL 5 BASIC10.77□□□□□ -0.68
ALMS1Q8TCU4 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC10.77□□□□□ -0.68
ALMS1Q8TCU4 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC10.77□□□□□ -0.68
ALMS1Q8TCU4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
ALMS1Q8TCU4 AL391256.1-201ENST00000443260 1855 ntBASIC10.77□□□□□ -0.68
ALMS1Q8TCU4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC10.77□□□□□ -0.68
ALMS1Q8TCU4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
ALMS1Q8TCU4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 AC135050.7-201ENST00000624508 2218 ntBASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 HIST2H2BB-201ENST00000449108 381 ntBASIC10.77□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms