Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 AP006288.1-201ENST00000446065 395 ntBASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 AC093724.1-201ENST00000448659 1027 ntBASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 KRT8P48-201ENST00000515599 1220 ntBASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 AC243562.1-201ENST00000560672 389 ntBASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 AC022145.2-201ENST00000598203 171 ntBASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 AC055717.3-201ENST00000622967 595 ntBASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 AL513210.1-201ENST00000629608 234 ntBASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 AC134684.3-201ENST00000641758 218 ntBASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 SPCS2P4-201ENST00000436160 681 ntBASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 AC073389.1-201ENST00000595595 795 ntBASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 AL365330.1-201ENST00000607459 531 ntBASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 AL691403.2-201ENST00000618460 490 ntBASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RAB42Q8N4Z0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.92■□□□□ 0.14
RAB42Q8N4Z0 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.92■□□□□ 0.14
RAB42Q8N4Z0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB42Q8N4Z0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.92■□□□□ 0.14
RAB42Q8N4Z0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAB42Q8N4Z0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.92■□□□□ 0.14
RAB42Q8N4Z0 ALOX12P2-203ENST00000570921 1945 ntBASIC15.92■□□□□ 0.14
RAB42Q8N4Z0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RAB42Q8N4Z0 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RAB42Q8N4Z0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms